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SCNpilot_P_inoc_Novosphingobium_63_5

SCNpilot_P_inoc_Sphingomonadales_63_6
In projects: SCNpilot_P_inoc  |  SCN_92

Consensus taxonomy: Sphingomonadales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Description

highly fragmented

Displaying items 201-210 of 210 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_p_inoc_scaffold_6582
Genus: Novosphingobium (55.56%)
9 6275 bp 60.37 4.88 81.56
scnpilot_p_inoc_scaffold_8674
Order: Sphingomonadales (85.71%)
7 5180 bp 61.95 4.60 81.49
scnpilot_p_inoc_scaffold_2766
Genus: Novosphingobium (75%)
8 11510 bp 62.72 6.01 81.37
scnpilot_p_inoc_scaffold_1574
Order: Sphingomonadales (68.42%)
19 18841 bp 59.94 5.27 80.95
scnpilot_p_inoc_scaffold_9444
Order: Sphingomonadales (71.43%)
7 4881 bp 62.61 4.67 79.53
scnpilot_p_inoc_scaffold_7048
Order: Sphingomonadales (87.5%)
8 5998 bp 62.89 4.98 79.28
scnpilot_p_inoc_scaffold_2621
Order: Sphingomonadales (92.31%)
13 12055 bp 63.15 6.12 78.56
scnpilot_p_inoc_scaffold_16329
Genus: Novosphingobium (50%)
4 4121 bp 63.89 4.95 78.55
scnpilot_p_inoc_scaffold_6325
Order: Sphingomonadales (100%)
5 6445 bp 64.17 5.56 78.34
scnpilot_p_inoc_scaffold_3746
Species: Altererythrobacter atlanticus (62.5%)
8 9198 bp 63.33 5.81 78.05
Displaying items 201-210 of 210 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.