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SCNpilot_solid_1_scaffold_85

Search features with annotation key words

Displaying items 31-60 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_85_31
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32707..34374)
DNA (1668bp) protein (556aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B6AD5B
Periplasmic beta-glucosidase {ECO:0000313|EMBL:KIC94827.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumi
hypothetical protein
SCNpilot_solid_1_scaffold_85_32
Winogradskyella psychrotolerans, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34513..35583)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7VXI0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EPR74851.1}; TaxID=641526 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella ps
hypothetical protein
SCNpilot_solid_1_scaffold_85_33
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35603..37156)
DNA (1554bp) protein (518aa)
glycan metabolism protein RagB n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029A2C90 rbh
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:CEA16659.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" so
SCNpilot_solid_1_scaffold_85_34
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37181..40486)
DNA (3306bp) protein (1102aa)
TonB-dependent receptor n=1 Tax=Mesoflavibacter zeaxanthinifaciens RepID=UPI000255B44C rbh
TonB-dependent receptor plug Tax=GWB2_Bacteroidetes_41_8_curated
TonB-dependent receptor plug
SCNpilot_solid_1_scaffold_85_35
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(40706..41806)
DNA (1101bp) protein (367aa)
Anti-FecI sigma factor, FecR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8X6_NIAKG
Putative anti-sigma factor {ECO:0000313|EMBL:GAO42772.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumiba
anti-FecI sigma factor FecR
SCNpilot_solid_1_scaffold_85_36
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(42082..43098)
DNA (1017bp) protein (339aa)
Anti-FecI sigma factor, FecR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THI3_NIAKG
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEW02829.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreen
SCNpilot_solid_1_scaffold_85_37
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(43170..43715)
DNA (546bp) protein (182aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THI2_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW02828.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" sourc
SCNpilot_solid_1_scaffold_85_38
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

44080..45705
DNA (1626bp) protein (542aa)
Xanthan lyase n=1 Tax=Niabella soli DSM 19437 RepID=H1NL74_9SPHI rbh
xanthan lyase
Xanthan lyase {ECO:0000313|EMBL:AHF14301.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_solid_1_scaffold_85_39
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

45735..47000
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NL73_9SPHI
xanthan lyase
Xanthan lyase {ECO:0000313|EMBL:AHF14302.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_solid_1_scaffold_85_40
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

47007..47405
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NL73_9SPHI
xanthan lyase
Xanthan lyase {ECO:0000313|EMBL:AHF14302.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_solid_1_scaffold_85_41
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

47447..49174
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QIN6_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB39962.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingual
SCNpilot_solid_1_scaffold_85_42
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(49359..51602)
DNA (2244bp) protein (748aa)
(P)ppGpp synthetase I, SpoT/RelA n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJT8_NIAKG rbh
(P)ppGpp synthase {ECO:0000313|EMBL:GAO45016.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter peta
(p)ppGpp synthetase I SpoT/RelA
SCNpilot_solid_1_scaffold_85_trna_1
unknown

Not on your lists

51685..51766
DNA (82bp)
transferRNA
SCNpilot_solid_1_scaffold_85_43
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

51919..53298
DNA (1380bp) protein (460aa)
Trigger factor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJU1_NIAKG
trigger factor
Trigger factor {ECO:0000313|EMBL:AEW01839.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DS
SCNpilot_solid_1_scaffold_85_44
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

53566..54258
DNA (693bp) protein (231aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-R
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQE8_NIAKG rbh
ATP-dependent Clp protease proteolytic subunit ClpP
SCNpilot_solid_1_scaffold_85_45
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

54281..54907
DNA (627bp) protein (209aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopep
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQE7_NIAKG
ATP-dependent Clp protease proteolytic subunit
SCNpilot_solid_1_scaffold_85_46
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

55128..56360
DNA (1233bp) protein (411aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQE6_NIAKG rbh
ATP-dependent Clp protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacterial
SCNpilot_solid_1_scaffold_85_47
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

56387..56668
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP74_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO45025.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_85_48
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(56732..57874)
DNA (1143bp) protein (381aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:AEW03190.1}; EC=1.3.8.1 {ECO:0000313|EMBL:AEW03190.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagacea
Butyryl-CoA dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP72_NIAKG rbh
butyryl-CoA dehydrogenase
SCNpilot_solid_1_scaffold_85_49
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(57928..58863)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036ADDDE
DNA uptake protein and related DNA-binding protein
DNA uptake protein and related DNA-binding protein {ECO:0000313|EMBL:AEW03189.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" so
SCNpilot_solid_1_scaffold_85_50
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(59012..59728)
DNA (717bp) protein (239aa)
Beta-lactamase domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP68_NIAKG rbh
beta-lactamase
Beta-lactamase domain protein {ECO:0000313|EMBL:AEW03186.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koree
SCNpilot_solid_1_scaffold_85_51
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(59902..60171)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000370F53A
Uncharacterized protein {ECO:0000313|EMBL:KIC92863.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_85_52
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(60306..61862)
DNA (1557bp) protein (519aa)
Response regulator receiver protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP66_NIAKG rbh
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AEW03184.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella
SCNpilot_solid_1_scaffold_85_53
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

61958..63163
DNA (1206bp) protein (402aa)
Metal dependent phosphohydrolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP65_NIAKG
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AEW03183.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella ko
SCNpilot_solid_1_scaffold_85_54
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

63169..64215
DNA (1047bp) protein (349aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobac
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP64_NIAKG rbh
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
SCNpilot_solid_1_scaffold_85_55
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

64294..65697
DNA (1404bp) protein (468aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; UDP-3-O-[3-hydroxymyri
UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase, 3-hydroxyacyl-(Acyl-carrier-protein) dehydratase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP63_NIAKG rbh
UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase, 3-hydroxyacyl-(acyl-carrier-protein) dehydratase
SCNpilot_solid_1_scaffold_85_56
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

65809..66615
DNA (807bp) protein (269aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=700598 species="Bacteria; Bacteroidetes; Sp
Acyl-(Acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP62_NIAKG rbh
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase
SCNpilot_solid_1_scaffold_85_57
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

66596..67231
DNA (636bp) protein (212aa)
ABC transporter related protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP61_NIAKG
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC92458.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Fl
ABC transporter
SCNpilot_solid_1_scaffold_85_58
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

67378..68622
DNA (1245bp) protein (415aa)
Sodium/hydrogen exchanger n=1 Tax=Pedobacter sp. BAL39 RepID=A6EBA6_9SPHI rbh
Sodium/hydrogen exchanger {ECO:0000313|EMBL:EDM37005.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp.
sodium/proton antiporter, cpa1 family
SCNpilot_solid_1_scaffold_85_59
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(68659..69873)
DNA (1215bp) protein (405aa)
Alanine dehydrogenase {ECO:0000313|EMBL:AEW03176.1}; EC=1.4.1.1 {ECO:0000313|EMBL:AEW03176.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; N
Alanine dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP58_NIAKG rbh
Alanine dehydrogenase
Displaying items 31-60 of 91 in total

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