ggKbase home page

SCNpilot_solid_1_scaffold_85

Search features with annotation key words

Displaying items 61-90 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_85_60
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(69911..70336)
DNA (426bp) protein (142aa)
Uncharacterized protein family UPF0079, ATPase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP57_NIAKG
hypothetical protein
Uncharacterized protein family UPF0079, ATPase {ECO:0000313|EMBL:AEW03175.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source
SCNpilot_solid_1_scaffold_85_61
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

70547..72673
DNA (2127bp) protein (709aa)
Heavy metal translocating P-type ATPase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP56_NIAKG rbh
ATPase P {ECO:0000313|EMBL:KIC92872.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
heavy metal translocating P-type ATPase
SCNpilot_solid_1_scaffold_85_62
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

72998..74887
DNA (1890bp) protein (630aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037A5747
RecQ familyATP-dependent DNA helicase
ATP-dependent DNA helicase, RecQ family {ECO:0000313|EMBL:AEW03173.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niast
SCNpilot_solid_1_scaffold_85_63
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(75053..76603)
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP53_NIAKG rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03171.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_85_64
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(76659..77030)
DNA (372bp) protein (124aa)
Chaperonin Cpn10 n=1 Tax=Niabella soli DSM 19437 RepID=H1NPX5_9SPHI
chaperonin
Chaperonin {ECO:0000313|EMBL:AHF14893.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_solid_1_scaffold_85_65
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

77155..77853
DNA (699bp) protein (233aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP51_NIAKG
Putative two-component response regulator {ECO:0000313|EMBL:GAO45042.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" sour
two component transcriptional regulator, winged helix family
SCNpilot_solid_1_scaffold_85_66
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(77922..79049)
DNA (1128bp) protein (376aa)
FO synthase, subunit 2 n=1 Tax=Niabella soli DSM 19437 RepID=H1NQ56_9SPHI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF16361.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
SCNpilot_solid_1_scaffold_85_67
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

79208..80407
DNA (1200bp) protein (400aa)
PDZ/DHR/GLGF domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF52_NIAKG rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO42213.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
PDZ/DHR/GLGF domain-containing protein
SCNpilot_solid_1_scaffold_85_68
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

80476..81714
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003758396 rbh
peptidase M16 domain-containing protein
Peptidase M16 domain protein {ECO:0000313|EMBL:ACU58202.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga
SCNpilot_solid_1_scaffold_85_69
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

81732..83012
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036D8B88 rbh
Peptidase M16 {ECO:0000313|EMBL:KIC96441.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilv
peptidase M16 domain-containing protein
SCNpilot_solid_1_scaffold_85_70
unknown

Not on your lists

comp(83100..83966)
DNA (867bp) protein (289aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_85_71
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(83998..85689)
DNA (1692bp) protein (564aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RR91_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ17577.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterel
SCNpilot_solid_1_scaffold_85_72
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(85718..88849)
DNA (3132bp) protein (1044aa)
TonB-dependent receptor plug n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RR92_LEAB4
tonb-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ADQ17578.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbet
SCNpilot_solid_1_scaffold_85_73
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(89209..90636)
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NRM1_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC93224.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_85_74
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(90710..93928)
DNA (3219bp) protein (1073aa)
TonB-dependent receptor plug n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLK5_NIAKG rbh
Membrane protein {ECO:0000313|EMBL:KIC93225.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solis
TonB-dependent receptor plug
SCNpilot_solid_1_scaffold_85_75
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(94227..96566)
DNA (2340bp) protein (780aa)
Exporter of the RND superfamily protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMI3_NIAKG
RND superfamily exporter
Exporter of the RND superfamily protein {ECO:0000313|EMBL:AEW01971.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastel
SCNpilot_solid_1_scaffold_85_76
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

96843..97580
DNA (738bp) protein (246aa)
DNA repair protein RecO n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMI5_NIAKG
DNA replication and repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphi
SCNpilot_solid_1_scaffold_85_77
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

98215..99462
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000382E1ED
Uncharacterized protein {ECO:0000313|EMBL:KIC96046.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_85_78
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(99691..100929)
DNA (1239bp) protein (413aa)
L-fucose:H+ symporter permease n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVT6_SOLCM rbh
L-fucose:H+ symporter permease rbh
L-fucose:H+ symporter permease {ECO:0000313|EMBL:AFD06709.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea c
SCNpilot_solid_1_scaffold_85_79
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(100958..101737)
DNA (780bp) protein (260aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEW02925.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEW02925.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacterii
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJY7_NIAKG rbh
3-oxoacyl-(acyl-carrier-protein) reductase rbh
SCNpilot_solid_1_scaffold_85_80
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(101815..102639)
DNA (825bp) protein (275aa)
Amidohydrolase 2 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJY8_NIAKG rbh
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:AEW02926.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain
SCNpilot_solid_1_scaffold_85_81
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

Not on your lists

comp(102686..103051)
DNA (366bp) protein (122aa)
S23 ribosomal protein id=2618939 bin=GWF2_Bacteroidetes_43_63 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
S23 ribosomal protein Tax=GWF2_Bacteroidetes_43_63_curated
S23 ribosomal protein
SCNpilot_solid_1_scaffold_85_82
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(103117..103788)
DNA (672bp) protein (224aa)
G-D-S-L family lipolytic protein n=1 Tax=Rudanella lutea RepID=UPI00036AE57E
G-D-S-L family lipolytic protein
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:ACT94357.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (s
SCNpilot_solid_1_scaffold_85_83
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(103865..104197)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00035C0ED3
Contig_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ21353.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="F
hypothetical protein
SCNpilot_solid_1_scaffold_85_84
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(104225..105085)
DNA (861bp) protein (287aa)
Ureidoglycolate lyase {ECO:0000313|EMBL:AEW02928.1}; EC=4.3.2.3 {ECO:0000313|EMBL:AEW02928.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; N
Ureidoglycolate lyase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJZ0_NIAKG rbh
ureidoglycolate lyase rbh
SCNpilot_solid_1_scaffold_85_85
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

105223..106659
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003719872
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:KIC94705.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibact
methylmalonyl-CoA mutase
SCNpilot_solid_1_scaffold_85_86
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

106670..108625
DNA (1956bp) protein (652aa)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:AEW02931.1}; EC=5.4.99.2 {ECO:0000313|EMBL:AEW02931.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagacea
Methylmalonyl-CoA mutase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJZ3_NIAKG
methylmalonyl-CoA mutase
SCNpilot_solid_1_scaffold_85_87
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108763..110664)
DNA (1902bp) protein (634aa)
Sulfatase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDD9_9SPHI rbh
sulfatase Tax=GWC2_Geobacteraceae_53_11_curated
sulfatase
SCNpilot_solid_1_scaffold_85_88
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

110775..112082
DNA (1308bp) protein (436aa)
sterol desaturase n=1 Tax=Niabella aurantiaca RepID=UPI00037DB3BC rbh
Sterol desaturase {ECO:0000313|EMBL:KIC93677.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter soli
fatty acid hydroxylase
SCNpilot_solid_1_scaffold_85_89
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

112160..113212
DNA (1053bp) protein (351aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HA
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRT3_NIAKG rbh
23S rRNA m(2)A-2503 methyltransferase
Displaying items 61-90 of 91 in total

View Taxonomy