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SCNpilot_solid_2_scaffold_90

Search features with annotation key words

Displaying items 31-60 of 130 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_90_30
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34625..36232)
DNA (1608bp) protein (536aa)
Na+/H+ antiporter n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0H7_9BRAD rbh
Na+/H+ antiporter {ECO:0000313|EMBL:EFI53207.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1N
Na+/H+ antiporter; K03316 monovalent cation:H+ antiporter, CPA1 family rbh
SCNpilot_solid_2_scaffold_90_31
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36242..36955)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJU6_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30602.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein rbh
SCNpilot_solid_2_scaffold_90_32
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36963..37937)
DNA (975bp) protein (325aa)
ispA; geranyltranstransferase (EC:2.5.1.10); K00795 farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] rbh
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NWL5_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30603.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_solid_2_scaffold_90_33
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38021..38731
DNA (711bp) protein (237aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase MtgA (EC:2.4.2.-); K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-] rbh
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0H4_9BRAD rbh
SCNpilot_solid_2_scaffold_90_34
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


38864..39049
DNA (186bp) protein (62aa)
50S ribosomal protein L32 n=4 Tax=Bradyrhizobiaceae RepID=RL32_OLICO
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scra
SCNpilot_solid_2_scaffold_90_35
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39162..39899
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0H2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG10341.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_90_36
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40479..42197
DNA (1719bp) protein (573aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0H1_9BRAD rbh
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EFI53201.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1
diguanylate cyclase/phosphodiesterase rbh
SCNpilot_solid_2_scaffold_90_37
unknown

Not on your lists

42166..42444
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_solid_2_scaffold_90_38
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42554..43153)
DNA (600bp) protein (200aa)
Polyhydroxyalkanoate synthesis repressor PhaR n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQB0_AFIFE rbh
Polyhydroxyalkanoate synthesis repressor PhaR {ECO:0000313|EMBL:EKS30609.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afip
phaR; polyhydroxyalkanoate synthesis repressor rbh
SCNpilot_solid_2_scaffold_90_39
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43428..44606
DNA (1179bp) protein (393aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EFI53198.1}; EC=2.3.1.9 {ECO:0000313|EMBL:EFI53198.1};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiace
phbA; acetyl-CoA acetyltransferase PhbA (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] rbh
Acetyl-CoA acetyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0G8_9BRAD rbh
SCNpilot_solid_2_scaffold_90_40
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44763..45488
DNA (726bp) protein (242aa)
phbB1; acetoacetyl-CoA reductase PhbB (EC:1.1.1.36); K00023 acetoacetyl-CoA reductase [EC:1.1.1.36] rbh
Acetoacetyl-CoA reductase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NNA0_AFIFE rbh
Acetoacetyl-CoA reductase {ECO:0000313|EMBL:EFI53197.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_solid_2_scaffold_90_41
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45550..46434
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0G6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI53196.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
drug/metabolite transporter permease rbh
SCNpilot_solid_2_scaffold_90_42
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46444..48000)
DNA (1557bp) protein (519aa)
Amidase {ECO:0000313|EMBL:AEI05131.1}; EC=3.5.1.4 {ECO:0000313|EMBL:AEI05131.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" so
Amidase n=2 Tax=Oligotropha carboxidovorans RepID=B6JA12_OLICO rbh
peptide amidase rbh
SCNpilot_solid_2_scaffold_90_43
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48322..48759)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0G5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI53195.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
cupin superfamily protein; K09705 hypothetical protein
SCNpilot_solid_2_scaffold_90_44
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48759..49526)
DNA (768bp) protein (256aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000
gloB; hydroxyacylglutathione hydrolase GloB (EC:3.1.2.6) rbh
Hydroxyacylglutathione hydrolase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0G4_9BRAD rbh
SCNpilot_solid_2_scaffold_90_45
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49640..50383
DNA (744bp) protein (248aa)
Methyltransferase type 11 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0G3_9BRAD rbh
Methyltransferase type 11 {ECO:0000313|EMBL:EFI53193.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
methyltransferase type 11 rbh
SCNpilot_solid_2_scaffold_90_46
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50399..51091)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NWN0_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30618.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein rbh
SCNpilot_solid_2_scaffold_90_47
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51566..52444)
DNA (879bp) protein (293aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltra
HemK family modification methylase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] rbh
Release factor glutamine methyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0G1_9BRAD rbh
SCNpilot_solid_2_scaffold_90_48
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52441..53517)
DNA (1077bp) protein (359aa)
Peptide chain release factor 1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0G0_9BRAD rbh
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brady
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 rbh
SCNpilot_solid_2_scaffold_90_49
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53572..55839)
DNA (2268bp) protein (756aa)
ptsP; phosphoenolpyruvate-protein phosphotransferase PtsP (EC:2.7.3.9); K08484 phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] rbh
PTSINtr with GAF domain, PtsP n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0F9_9BRAD rbh
PTSINtr with GAF domain, PtsP {ECO:0000313|EMBL:EFI53189.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_solid_2_scaffold_90_50
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55957..56637)
DNA (681bp) protein (227aa)
MarC family membrane protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJW7_AFIFE rbh
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690
antibiotic resistance protein; K05595 multiple antibiotic resistance protein rbh
SCNpilot_solid_2_scaffold_90_51
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56653..57909)
DNA (1257bp) protein (419aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.
aspartate kinase (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4] rbh
Aspartokinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0F7_9BRAD rbh
SCNpilot_solid_2_scaffold_90_52
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58041..58517
DNA (477bp) protein (159aa)
Membrane-flanked domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0F6_9BRAD
Bacterial membrane flanked domain protein {ECO:0000313|EMBL:CEG10357.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia fel
hypothetical protein
SCNpilot_solid_2_scaffold_90_53
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58530..59276
DNA (747bp) protein (249aa)
ubiG; 3-demethylubiquinone-9 3-methyltransferase UbiG (EC:2.1.1.64) rbh
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NT31_AFIFE rbh
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiqui
SCNpilot_solid_2_scaffold_90_54
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59377..60273
DNA (897bp) protein (299aa)
Permease of the drug/metabolite transporter n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0F4_9BRAD rbh
Permease of the drug/metabolite transporter {ECO:0000313|EMBL:EFI53184.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
hypothetical protein rbh
SCNpilot_solid_2_scaffold_90_55
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60270..60710)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJX3_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30627.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein; K08978 putative membrane protein
SCNpilot_solid_2_scaffold_90_56
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60726..61190)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0F3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI53183.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_solid_2_scaffold_90_57
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61187..62074)
DNA (888bp) protein (296aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0F2_9BRAD rbh
N-carbamoyl-D-amino acid hydrolase {ECO:0000313|EMBL:CEG10361.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat
putative amidohydrolase rbh
SCNpilot_solid_2_scaffold_90_58
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62071..62346)
DNA (276bp) protein (92aa)
Glutaredoxin 3 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0F1_9BRAD
Glutaredoxin-3 {ECO:0000313|EMBL:CEG10362.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bac
glutaredoxin; K03676 glutaredoxin 3
SCNpilot_solid_2_scaffold_90_59
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62379..62927)
DNA (549bp) protein (183aa)
ComF family protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NNC4_AFIFE
ComF family protein {ECO:0000313|EMBL:EKS30631.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
amidophosphoribosyltransferase
Displaying items 31-60 of 130 in total

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