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SCNpilot_solid_2_scaffold_90

Search features with annotation key words

Displaying items 91-120 of 130 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_90_89
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91016..91594
DNA (579bp) protein (193aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=666684 species="Ba
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] rbh
2'-5' RNA ligase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAX4_9BRAD rbh
SCNpilot_solid_2_scaffold_90_90
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91654..92832
DNA (1179bp) protein (393aa)
AFG1-family ATPase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAX5_9BRAD rbh
AFG1-like ATPase {ECO:0000313|EMBL:CEG09762.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease b
ATPase; K06916 rbh
SCNpilot_solid_2_scaffold_90_91
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92953..93921
DNA (969bp) protein (323aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=1035 species="Bacteria; Prot
mdh; malate dehydrogenase (EC:1.1.1.37); K00024 malate dehydrogenase [EC:1.1.1.37] rbh
Malate dehydrogenase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAX6_9BRAD rbh
SCNpilot_solid_2_scaffold_90_92
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94199..97141
DNA (2943bp) protein (981aa)
sucA; 2-oxoglutarate dehydrogenase componentSucA (EC:1.2.4.2); K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] rbh
2-oxoglutarate dehydrogenase, E1 subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAX7_9BRAD rbh
2-oxoglutarate dehydrogenase, E1 subunit {ECO:0000313|EMBL:EFI50054.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp
SCNpilot_solid_2_scaffold_90_93
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97235..98476
DNA (1242bp) protein (414aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxI
sucB; dihydrolipoamide succinyltransferase (EC:2.3.1.61); K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] rbh
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAX8_9BRAD rbh
SCNpilot_solid_2_scaffold_90_94
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98600..100000
DNA (1401bp) protein (467aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobi
lpdA; dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] rbh
Dihydrolipoyl dehydrogenase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAX9_9BRAD rbh
SCNpilot_solid_2_scaffold_90_95
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100210..100800)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAY0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI50057.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
SCNpilot_solid_2_scaffold_90_96
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101057..101455
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLF7_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29956.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_solid_2_scaffold_90_97
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101467..102432)
DNA (966bp) protein (322aa)
Tyrosine recombinase XerC n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAY1_9BRAD rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scra
xerC; site-specific tyrosine recombinase XerC; K03733 integrase/recombinase XerC rbh
SCNpilot_solid_2_scaffold_90_98
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102592..104766
DNA (2175bp) protein (725aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=883080 species="Bacteria; P
priA; primosomal assembly protein PriA (EC:3.6.1.-); K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] rbh
Primosomal protein N n=1 Tax=Afipia felis ATCC 53690 RepID=K8NNG1_AFIFE rbh
SCNpilot_solid_2_scaffold_90_99
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105056..105517)
DNA (462bp) protein (154aa)
Rare lipoprotein A n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAY3_9BRAD
Rare lipoprotein A {ECO:0000313|EMBL:EFI50060.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1
rare lipoprotein A family protein; K03642 rare lipoprotein A
SCNpilot_solid_2_scaffold_90_100
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106136..106696
DNA (561bp) protein (187aa)
atpH; F0F1 ATP synthase subunit delta (EC:3.6.3.14); K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] rbh
ATP synthase subunit delta n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAY4_9BRAD rbh
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; T
SCNpilot_solid_2_scaffold_90_101
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106696..108228
DNA (1533bp) protein (511aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
atpA; ATP synthase subunit alpha (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] rbh
ATP synthase subunit alpha n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAY5_9BRAD rbh
SCNpilot_solid_2_scaffold_90_102
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108291..109172
DNA (882bp) protein (294aa)
atpG; F0F1 ATP synthase subunit gamma (EC:3.6.3.14); K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] rbh
ATP synthase gamma chain n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAY6_9BRAD rbh
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=6666
SCNpilot_solid_2_scaffold_90_103
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109184..109588
DNA (405bp) protein (135aa)
Peroxiredoxin, Ohr subfamily n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAY7_9BRAD
Peroxiredoxin, Ohr subfamily {ECO:0000313|EMBL:EFI50064.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
OsmC-like protein
SCNpilot_solid_2_scaffold_90_104
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109610..111040
DNA (1431bp) protein (477aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
atpD; F0F1 ATP synthase subunit beta (EC:3.6.3.14); K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] rbh
ATP synthase subunit beta n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAY8_9BRAD rbh
SCNpilot_solid_2_scaffold_90_105
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111046..111459
DNA (414bp) protein (138aa)
atpC; ATP synthase epsilon chain AtpC; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14]
ATP synthase epsilon chain n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAY9_9BRAD
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxI
SCNpilot_solid_2_scaffold_90_106
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(111608..112111)
DNA (504bp) protein (168aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298};; (Di)nucleoside polyphosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; TaxID=883080 specie
dinucleoside polyphosphate hydrolase (EC:3.6.1.-); K08311 putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] rbh
RNA pyrophosphohydrolase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLE9_AFIFE rbh
SCNpilot_solid_2_scaffold_90_107
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112172..113341)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAZ1_9BRAD rbh
Divergent polysaccharide deacetylase {ECO:0000313|EMBL:CEG09746.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (C
hypothetical protein; K09798 hypothetical protein rbh
SCNpilot_solid_2_scaffold_90_108
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(113415..113969)
DNA (555bp) protein (185aa)
maltose O-acetyltransferase (EC:2.3.1.79); K00661 maltose O-acetyltransferase [EC:2.3.1.79] rbh
Maltose O-acetyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAZ2_9BRAD rbh
Maltose O-acetyltransferase {ECO:0000313|EMBL:CEG09745.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratc
SCNpilot_solid_2_scaffold_90_109
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(114058..115401)
DNA (1344bp) protein (448aa)
carboxy--processing protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] rbh
C-terminal processing peptidase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NUN9_AFIFE rbh
C-terminal processing peptidase {ECO:0000313|EMBL:EKS29943.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC
SCNpilot_solid_2_scaffold_90_110
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115398..116723)
DNA (1326bp) protein (442aa)
Peptidase M23 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAZ4_9BRAD rbh
Peptidase M23 {ECO:0000313|EMBL:EFI50071.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.
putative metallopeptidase rbh
SCNpilot_solid_2_scaffold_90_111
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116815..117297)
DNA (483bp) protein (161aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP
rlmH; ribosomal RNA large subunit methyltransferase H (EC:2.1.1.-); K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAZ5_9BRAD rbh
SCNpilot_solid_2_scaffold_90_112
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117420..117809)
DNA (390bp) protein (130aa)
Ribosomal silencing factor RsfS n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAZ6_9BRAD
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Ca
iojap protein family; K09710 ribosome-associated protein
SCNpilot_solid_2_scaffold_90_113
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117955..118578)
DNA (624bp) protein (208aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244};
nadD; nicotinate-nucleotide adenylyltransferase NadD (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] rbh
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAZ7_9BRAD rbh
SCNpilot_solid_2_scaffold_90_114
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118575..119867)
DNA (1293bp) protein (431aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:000
proA; gamma-glutamyl phosphate reductase ProA (EC:1.2.1.41); K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] rbh
Gamma-glutamyl phosphate reductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAZ8_9BRAD rbh
SCNpilot_solid_2_scaffold_90_115
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(119962..121116)
DNA (1155bp) protein (385aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|H
proB; glutamate 5-kinase ProB (EC:2.7.2.11); K00931 glutamate 5-kinase [EC:2.7.2.11] rbh
Glutamate 5-kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAZ9_9BRAD rbh
SCNpilot_solid_2_scaffold_90_116
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(121167..122240)
DNA (1074bp) protein (358aa)
GTPase Obg n=1 Tax=Afipia felis ATCC 53690 RepID=K8NUN1_AFIFE rbh
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobia
obgE; GTPase ObgE; K03979 GTP-binding protein rbh
SCNpilot_solid_2_scaffold_90_117
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122468..123055)
DNA (588bp) protein (196aa)
GCN5-related N-acetyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VB01_9BRAD rbh
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EFI50078.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.
acetyltransferase rbh
SCNpilot_solid_2_scaffold_90_118
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(123190..123459)
DNA (270bp) protein (90aa)
50S ribosomal protein L27 n=2 Tax=Afipia RepID=D6VB02_9BRAD
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27
Displaying items 91-120 of 130 in total

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