ggKbase home page

SCNpilot_solid_2_scaffold_90_118

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(123190..123459)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L27 n=2 Tax=Afipia RepID=D6VB02_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 89.0
  • Bit_score: 179
  • Evalue 1.40e-42
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53 similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 89.0
  • Bit_score: 179
  • Evalue 1.90e-42
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 89.0
  • Bit_score: 176
  • Evalue 2.80e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGGCTCACAAAAAAGCAGGCGGTTCATCGCGCAACGGGCGTGACTCGGCGGGCAAGCGCCTTGGCATCAAGGCGTTCGGCGGCGAGATCGTGATTCCGGGCAACATTATTGCGCGCCAGCGCGGCACCACCTGGCATCCGGGTGCGAATGTGGGCATGGGCACCGACCATACCCTCTTCGCCAAGGCCGAAGGCCGCGTAGAATTCCGCGCCAAAGCGGGCGGTCGTACCTTCGTCTCCGTAGTCCCCGTGGCGGAAGCGGCTGAATAG
PROTEIN sequence
Length: 90
MAHKKAGGSSRNGRDSAGKRLGIKAFGGEIVIPGNIIARQRGTTWHPGANVGMGTDHTLFAKAEGRVEFRAKAGGRTFVSVVPVAEAAE*