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SCNpilot_solid_2_scaffold_90_119

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(123515..124018)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L21 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VB03_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 173.0
  • Bit_score: 303
  • Evalue 1.50e-79
  • rbh
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia. similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 173.0
  • Bit_score: 303
  • Evalue 2.20e-79
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 166.0
  • Bit_score: 268
  • Evalue 1.30e-69

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
ATGTTCGCAGTCATCAAAACGGGCGGCAAGCAGTACCGCGTCGTCCCGAATGATGTGCTTGAGATTGGCAAGATCGCCGGCGAAGTCGGCTCGATCGTGCAGCTTGGTGAAGTTCTGGTGGTCGGCGGCGACACGCCGGTGCTCGGCGGCCCCCTCGTGGCAGGCGCGTCGGTCGCGGCGGAAGTGCTCGATCACAAGCGCGGCCCGAAGGTCATCGCCTTCAAGAAGCGCCGCCGCAAGAATTCAAAGCGCAAGCGCGGCTACCGTGACGAGATTACCGTGATCCGCGTCACCGAGATCCTGACCGACGGCAAGGCGCCTTCGATCGGACCGCGCCCGAAGAAGGAAAAGAAGGTCGAGGCTGCCGCCGAAGGCGACGCTCCGGCCAAGACCGCCAAGAAGGCTGCAGCTAAACCGGCGGCAAAGAAGGCGGCTCCGAAGGCCGCCGCCAAGAAGGCTCCCGCCAAAAAGGCGGCCCCGAAGGCGACAAGCGACAAAAAGTGA
PROTEIN sequence
Length: 168
MFAVIKTGGKQYRVVPNDVLEIGKIAGEVGSIVQLGEVLVVGGDTPVLGGPLVAGASVAAEVLDHKRGPKVIAFKKRRRKNSKRKRGYRDEITVIRVTEILTDGKAPSIGPRPKKEKKVEAAAEGDAPAKTAKKAAAKPAAKKAAPKAAAKKAPAKKAAPKATSDKK*