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SCNpilot_solid_2_scaffold_90_112

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(117420..117809)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal silencing factor RsfS n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAZ6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 128.0
  • Bit_score: 251
  • Evalue 5.40e-64
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Ca similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 128.0
  • Bit_score: 251
  • Evalue 7.50e-64
iojap protein family; K09710 ribosome-associated protein similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 128.0
  • Bit_score: 229
  • Evalue 5.30e-58

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGACGGAAGCAAAGTCTCCGTCCATCGCTGTCTTGAAGGCGCGTCCTGACGCCGACGAGACGCTCACCCTGATCCTCTCCCGCCTCGACGACATGAAGGCGGAAGAAACGGTTACTATCGACCTTCGCGGCAAATCCTCCATCACCGACTACATGGTCGTCACCACCGGACGGGTGAACCGTCACGTCGGTGCGATCGCGGAGAATGTCGCCAAGGGATTGAAGGAGAGCGGGATCGAAGCGCCGCACATCGAAGGGCTCGCCAATTGCGATTGGGTGCTGATCGATTCAGGCGACGTGATCGTTCACATTTTCCGGCCGGAAGTTCGTGAGTTCTACAATCTCGAAAAGATGTGGACCTCGGAGAAGCCGGCCAAGAAGGCGCGCTAA
PROTEIN sequence
Length: 130
MTEAKSPSIAVLKARPDADETLTLILSRLDDMKAEETVTIDLRGKSSITDYMVVTTGRVNRHVGAIAENVAKGLKESGIEAPHIEGLANCDWVLIDSGDVIVHIFRPEVREFYNLEKMWTSEKPAKKAR*