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SCNpilot_cont_1000_p_scaffold_139

Search features with annotation key words

Displaying items 1-30 of 131 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_139_1
unknown

Not on your lists

comp(1..429)
DNA (429bp) protein (143aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_139_2
unknown

Not on your lists

comp(443..661)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_139_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

838..1737
DNA (900bp) protein (300aa)
Beta-lactamase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9F7_NIAKG rbh
beta-lactamase rbh
Beta-lactamase {ECO:0000313|EMBL:AEV99147.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_139_4
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1928..2368
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K7H1_9FLAO
Glyoxalase {ECO:0000313|EMBL:KGO87677.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
Glyoxalase/bleomycin resistance protein/dioxygenase; K04750 PhnB protein
SCNpilot_cont_1000_p_scaffold_139_5
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2432..4003
DNA (1572bp) protein (524aa)
Copper type II ascorbate-dependent monooxygenase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KTF0_HALH1 rbh
Copper type II ascorbate-dependent monooxygenase rbh
Copper type II ascorbate-dependent monooxygenase {ECO:0000313|EMBL:AEE52364.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCNpilot_cont_1000_p_scaffold_139_6
unknown

Not on your lists

4015..4428
DNA (414bp) protein (138aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_139_7
unknown

Not on your lists

comp(4452..5243)
DNA (792bp) protein (264aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_139_8
unknown

Not on your lists

5423..6808
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000368CEAD
SCNpilot_cont_1000_p_scaffold_139_9
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6798..7520)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PC33_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU57661.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_139_10
Prevotella sp. CAG:1124, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7501..8001)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:1124 RepID=R5KIM8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCY64919.1}; TaxID=1262920 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:1124.;"
SCNpilot_cont_1000_p_scaffold_139_11
unknown

Not on your lists

comp(7994..8269)
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_139_12
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8269..10674)
DNA (2406bp) protein (802aa)
pheT; phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU45_CHIPD
SCNpilot_cont_1000_p_scaffold_139_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11097..12767
DNA (1671bp) protein (557aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12]
Replicative DNA helicase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU44_CHIPD
Replicative DNA helicase {ECO:0000313|EMBL:ACU64639.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_139_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12894..14024
DNA (1131bp) protein (377aa)
cysteine desulfurase; K04487 cysteine desulfurase [EC:2.8.1.7]
Cysteine desulfurase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI83_NIAKG
Cysteine desulfurase {ECO:0000313|EMBL:KIC93372.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SCNpilot_cont_1000_p_scaffold_139_15
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14111..15736
DNA (1626bp) protein (542aa)
Ca2+-binding protein, RTX toxin n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C996_DESTA
Uncharacterized protein {ECO:0000313|EMBL:KGL61850.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_85.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_139_16
unknown

Not on your lists

comp(15739..15999)
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_139_17
unknown

Not on your lists

16055..16276
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_139_18
unknown

Not on your lists

comp(16355..16498)
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_139_19
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

comp(16651..17400)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NLM2_9SPHI
hypothetical protein; K06890
Tax=CG_Bacteroid_01
SCNpilot_cont_1000_p_scaffold_139_20
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17623..18339
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B79F62 rbh
FkbM family methyltransferase
Methyltransferase FkbM family {ECO:0000313|EMBL:AEE53175.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCNpilot_cont_1000_p_scaffold_139_21
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18443..20320
DNA (1878bp) protein (626aa)
Divalent metal cation transporter MntH n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G4J1_9SPHI rbh
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
manganese transporter MntH; K03322 manganese transport protein rbh
SCNpilot_cont_1000_p_scaffold_139_22
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20386..23274)
DNA (2889bp) protein (963aa)
Tax=BJP_08E140C01_Bacteriodales_41_10
SCNpilot_cont_1000_p_scaffold_139_23
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23533..25758
DNA (2226bp) protein (742aa)
ATP-dependent DNA helicase RecQ; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12] rbh
ATP-dependent DNA helicase RecQ n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJT2_CHIPD rbh
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:ACU58273.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_139_24
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25874..27298)
DNA (1425bp) protein (475aa)
PSP1 domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PK31_CHIPD rbh
PSP1 domain-containing protein rbh
PSP1 domain protein {ECO:0000313|EMBL:ACU58372.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_139_25
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27434..28567)
DNA (1134bp) protein (378aa)
DNA polymerase III gamma/tau subunits-like protein; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7]
DNA polymerase III gamma/tau subunits-like protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PK32_CHIPD
DNA polymerase III gamma/tau subunits-like protein {ECO:0000313|EMBL:ACU58373.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_139_26
unknown

Not on your lists

28660..29229
DNA (570bp) protein (190aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_139_27
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29384..30226
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CIC0_ELIME
Uncharacterized protein {ECO:0000313|EMBL:EOR28755.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_139_28
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30242..30418
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PB05_CHIPD
hypothetical protein
Tax=BJP_08E140C01_Flavobacteriales_35_8
SCNpilot_cont_1000_p_scaffold_139_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(30509..30883)
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUG5_CHIPD
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_1000_p_scaffold_139_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(31018..31653)
DNA (636bp) protein (212aa)
50S ribosomal protein L10 n=1 Tax=Niabella soli DSM 19437 RepID=H1NSW4_9SPHI
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 131 in total

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