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SCNpilot_cont_1000_p_scaffold_122_58

Organism: SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(64291..65148)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Niabella soli DSM 19437 RepID=H1NPV4_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 285.0
  • Bit_score: 501
  • Evalue 5.00e-139
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:KIC94940.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 285.0
  • Bit_score: 504
  • Evalue 8.30e-140
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 285.0
  • Bit_score: 497
  • Evalue 2.30e-138

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 858
ATGAGGCAGTTAAAAATTGCCACCCAAATTACCAACCGCGACTCGCAGGCGGTGGAAAAATACCTTCAGGAGATCAGCAAAATATCGATGATCACCCCGGAGGAAGAAACTACACTTGCCCAGAAAATACATATGGGCGACCAGCGTGCATTGGAGAAATTGGTGAAAGCGAACCTTCGCTTCGTGGTATCTGTGGCAAAACAATATCAACACCAGGGCTTATCATTAAGCGACCTGATAAATGAAGGCAACCTTGGCCTGATCAAAGCTGCGCAACGCTTTGATGAAACTAAGGGTTTTAAATTCATATCGTATGCCGTATGGTGGATACGCCAGTCTATACTGCAGGCACTTGCCGAGCAGGGTCGCCTGGTGCGCCTGCCGCAAAATAAGATAGGCACCTACAATAAAGCCAATAAAGCATTCATAGCTTTCGAACAGGAAAATGAGCGTGAACCATCGACCGAAGAACTGGCTGAGATACTGGACATGAGTGAAACTGAAGTGACTAACATCTTCACCAGCAACTCACGCCATACTTCGCTGGACGCGCCTGTGCATGAAGCTGAAGATGTGGCCATGGGCGACCTGCTTGAAGGCAGCAGCGATACGGATGAAGACGTGATGAAGGACTCGCTACGTGCCGAGATAGGCCGTATCCTGAAATCGCTGAGTGTGCGTGAAGCGGAAATACTTGAAGCATATTTTGGACTGAAAGGCGACAACGGCCCGACCATAGAAGAAATAGGTGAAAAATATGACCTTACCAAAGAACGCATACGCCAGATAAAAGAGCGTGCTATCAAACGCTTACAGAAAACGCGTTACAGCAATGCGCTGAAAGTATATTTAGGTTAA
PROTEIN sequence
Length: 286
MRQLKIATQITNRDSQAVEKYLQEISKISMITPEEETTLAQKIHMGDQRALEKLVKANLRFVVSVAKQYQHQGLSLSDLINEGNLGLIKAAQRFDETKGFKFISYAVWWIRQSILQALAEQGRLVRLPQNKIGTYNKANKAFIAFEQENEREPSTEELAEILDMSETEVTNIFTSNSRHTSLDAPVHEAEDVAMGDLLEGSSDTDEDVMKDSLRAEIGRILKSLSVREAEILEAYFGLKGDNGPTIEEIGEKYDLTKERIRQIKERAIKRLQKTRYSNALKVYLG*