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SCNpilot_cont_1000_p_scaffold_122

Search features with annotation key words

Displaying items 1-30 of 147 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_122_1
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(163..495)
DNA (333bp) protein (111aa)
helix-turn-helix domain-containing protein n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029AE1D7
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERI88940.1}; TaxID=1321819 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes F0041.;"
HTH_3 family transcriptional regulator protein
SCNpilot_cont_1000_p_scaffold_122_2
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

comp(677..1030)
DNA (354bp) protein (118aa)
Putative uncharacterized protein id=1791253 bin=GWE2_Bacteroidetes_29_8 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein; K09153 hypothetical protein
Tax=GWE2_Bacteroidetes_29_8_curated
SCNpilot_cont_1000_p_scaffold_122_3
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1034..1741)
DNA (708bp) protein (236aa)
Glycosyl transferase family 2 id=3113020 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
family 2 glycosyl transferase
Tax=GWA2_Bacteroidetes_32_17_curated
SCNpilot_cont_1000_p_scaffold_122_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1814..2806)
DNA (993bp) protein (331aa)
Acyl-CoA reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPA7_NIAKG
acyl-CoA reductase
Acyl-CoA reductase {ECO:0000313|EMBL:AEV96713.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_122_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2883..3230
DNA (348bp) protein (116aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEF6_CHIPD
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:ACU63365.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_122_6
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(3304..3798)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SQF3_9FLAO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
SCNpilot_cont_1000_p_scaffold_122_7
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3951..5003)
DNA (1053bp) protein (351aa)
OmpA/MotB domain protein id=4190398 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=Krokinobacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
tpn50; OmpA family outer membrane protein
Tax=GWF2_Bacteroidetes_33_38_curated
SCNpilot_cont_1000_p_scaffold_122_8
unknown

Not on your lists

5004..5123
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_122_9
Kangiella geojedonensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5107..5520)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FAS4_FLAJ1
Uncharacterized protein {ECO:0000313|EMBL:AKE52977.1}; TaxID=914150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella geojedonensis.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_122_10
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5588..7546)
DNA (1959bp) protein (653aa)
Probable potassium transport system protein kup n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRE8_CHIPD rbh
K potassium transporter; K03549 KUP system potassium uptake protein rbh
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_122_11
unknown

Not on your lists

comp(7631..7849)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_122_12
unknown

Not on your lists

8092..8607
DNA (516bp) protein (172aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_122_13
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8905..11673
DNA (2769bp) protein (923aa)
Uncharacterized protein id=4326570 bin=GWF2_Bacteroidetes_33_38 species=Saprospira grandis genus=Saprospira taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein
Tax=GWF2_Bacteroidetes_33_38_curated
SCNpilot_cont_1000_p_scaffold_122_14
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11816..14605
DNA (2790bp) protein (930aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KUZ8_SOLCM
Uncharacterized protein {ECO:0000313|EMBL:KJS04639.1}; Flags: Fragment;; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_122_15
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(14663..15169)
DNA (507bp) protein (169aa)
sortase-like acyltransferase
Phosphinothricin N-acetyltransferase id=3881691 bin=GWF2_Bacteroidetes_33_16 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
Tax=BJP_IG2069_Ignavibacteriae_38_11
SCNpilot_cont_1000_p_scaffold_122_16
unknown

Not on your lists

comp(15231..15509)
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_122_17
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15772..17067)
DNA (1296bp) protein (432aa)
Cl-channel voltage-gated family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBT2_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:ETZ19571.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
Cl-channel voltage-gated family protein
SCNpilot_cont_1000_p_scaffold_122_18
unknown

Not on your lists

17382..17705
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_122_19
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17818..18996
DNA (1179bp) protein (393aa)
Aminopeptidase C {ECO:0000313|EMBL:EOR94807.1}; EC=3.4.22.40 {ECO:0000313|EMBL:EOR94807.1};; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
Aminopeptidase C n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GSH1_9SPHI rbh
aminopeptidase C rbh
SCNpilot_cont_1000_p_scaffold_122_20
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

19093..19740
DNA (648bp) protein (216aa)
NADP oxidoreductase coenzyme F420-dependent n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CTC7_SIDLE
NADP oxidoreductase coenzyme F420-dependent; K06988
Tax=RBG_16_Caldithrix_48_16_curated
SCNpilot_cont_1000_p_scaffold_122_21
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19826..21706
DNA (1881bp) protein (627aa)
Peptidase M1 membrane alanine aminopeptidase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZF3_PEDHD rbh
peptidase M1 membrane alanine aminopeptidase rbh
Peptidase M1 membrane alanine aminopeptidase {ECO:0000313|EMBL:ACU04649.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_cont_1000_p_scaffold_122_22
unknown

Not on your lists

21766..22767
DNA (1002bp) protein (334aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_122_23
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22853..25267
DNA (2415bp) protein (805aa)
TonB-dependent receptor plug n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEF8_FLUTR rbh
TonB-dependent receptor plug; K02014 iron complex outermembrane recepter protein rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:AEA43482.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_cont_1000_p_scaffold_122_24
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

comp(25272..26528)
DNA (1257bp) protein (419aa)
Geranylgeranyl reductase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XXT5_9BACT
Geranylgeranyl reductase {ECO:0000313|EMBL:EHO39758.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
geranylgeranyl reductase rbh
SCNpilot_cont_1000_p_scaffold_122_25
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26610..27593)
DNA (984bp) protein (328aa)
transketolase; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
Transketolase central region n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKT5_CHIPD
Transketolase central region {ECO:0000313|EMBL:ACU63845.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_122_26
unknown

Not on your lists

comp(27660..28184)
DNA (525bp) protein (175aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_122_27
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28204..29205)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRM4_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58917.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_122_28
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29207..29707)
DNA (501bp) protein (167aa)
Biotin/lipoyl attachment domain-containing protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRM3_CHIPD
biotin/lipoyl attachment domain-containing protein
Biotin/lipoyl attachment domain-containing protein {ECO:0000313|EMBL:ACU58916.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_122_29
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29858..32473
DNA (2616bp) protein (872aa)
peptidase M1 membrane alanine aminopeptidase; K01256 aminopeptidase N [EC:3.4.11.2]
Peptidase M1 membrane alanine aminopeptidase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRM2_CHIPD
Peptidase M1 membrane alanine aminopeptidase {ECO:0000313|EMBL:ACU58915.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_122_30
unknown

Not on your lists

comp(32411..32581)
DNA (171bp) protein (57aa)

This feature has no annotations

Displaying items 1-30 of 147 in total

View Taxonomy