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SCNpilot_cont_1000_p_scaffold_122

Search features with annotation key words

Displaying items 61-90 of 147 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_122_61
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(67563..68501)
DNA (939bp) protein (313aa)
Putative uncharacterized protein id=1879905 bin=GWB2_Ignavibacteria_35_12 species=Moorea producens genus=Moorea taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
histidine kinase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
SCNpilot_cont_1000_p_scaffold_122_62
unknown

Not on your lists

68622..68942
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_122_63
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(68951..70288)
DNA (1338bp) protein (446aa)
DEAD/DEAH box helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] rbh
DEAD/DEAH box helicase domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W1H5_DYAFD rbh
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ACT93705.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_cont_1000_p_scaffold_122_64
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(70301..71494)
DNA (1194bp) protein (398aa)
RNA methylase; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] rbh
Putative RNA methylase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKB2_CHIPD rbh
Putative RNA methylase {ECO:0000313|EMBL:ACU60198.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_122_65
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(71554..71796)
DNA (243bp) protein (81aa)
Transglycosylase associated protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3C967_9FLAO
Transglycosylase associated protein {ECO:0000313|EMBL:EJL66811.1}; Flags: Precursor;; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_122_66
unknown

Not on your lists

comp(71907..72281)
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_122_67
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

72477..73076
DNA (600bp) protein (200aa)
halocyanin precursor-like protein id=2001223 bin=GWD2_Bacteroidetes_40_43 species=Halococcus hamelinensis genus=Halococcus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_cont_1000_p_scaffold_122_68
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(73769..74506)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QU18_SPILD
hypothetical protein
Tax=RBG_16_Caldithrix_48_16_curated
SCNpilot_cont_1000_p_scaffold_122_69
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74518..75819)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F809_SORC5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAN91588.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_cont_1000_p_scaffold_122_70
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

76189..77517
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035CE9C7
DEAD/DEAH box helicase
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:AEV97793.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_122_71
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

77644..78861
DNA (1218bp) protein (406aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCT4_CHIPD rbh
DEAD/DEAH box helicase rbh
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ACU61433.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_122_72
BJP_08E140C01_10KDA_Chromatiales_49_130, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78892..79341)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Nocardia cyriacigeorgica (strain GUH-2) RepID=H6QYT8_NOCCG
hypothetical protein
Tax=BJP_08E140C01_10KDA_Chromatiales_49_130
SCNpilot_cont_1000_p_scaffold_122_73
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

79480..80010
DNA (531bp) protein (177aa)
uracil phosphoribosyltransferase; K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
Uracil phosphoribosyltransferase {ECO:0000313|EMBL:AEV97541.1}; EC=2.4.2.9 {ECO:0000313|EMBL:AEV97541.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Uracil phosphoribosyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ24_NIAKG
SCNpilot_cont_1000_p_scaffold_122_74
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

80026..80955
DNA (930bp) protein (310aa)
pyrB; aspartate carbamoyltransferase catalytic subunit; K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] rbh
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Aspartate carbamoyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PV07_CHIPD rbh
SCNpilot_cont_1000_p_scaffold_122_75
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

81119..81973
DNA (855bp) protein (285aa)
acetyl-CoA carboxylase, carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAC2_CHIPD rbh
SCNpilot_cont_1000_p_scaffold_122_76
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

82006..82458
DNA (453bp) protein (151aa)
SsrA-binding protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAC1_CHIPD
SsrA-binding protein; K03664 SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_122_77
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(82473..83333)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7J1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02246.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_122_78
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(83457..84791)
DNA (1335bp) protein (445aa)
Saccharopine dehydrogenase (NAD(+), L-glutamate-forming) {ECO:0000313|EMBL:ACU62876.1}; EC=1.5.1.9 {ECO:0000313|EMBL:ACU62876.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Saccharopine dehydrogenase (NAD(+), L-glutamate-forming) n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUW7_CHIPD rbh
saccharopine dehydrogenase rbh
SCNpilot_cont_1000_p_scaffold_122_79
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

84905..85348
DNA (444bp) protein (148aa)
Thioesterase superfamily protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI73_CHIPD
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ACU63635.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_122_80
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(85360..85947)
DNA (588bp) protein (196aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
dephospho-CoA kinase; K00859 dephospho-CoA kinase [EC:2.7.1.24]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036D0CAC
SCNpilot_cont_1000_p_scaffold_122_81
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(85959..86315)
DNA (357bp) protein (119aa)
Preprotein translocase, YajC subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGG1_NIAKG
preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:AEV97384.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_122_82
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(86342..86866)
DNA (525bp) protein (175aa)
Putative uncharacterized protein id=3953953 bin=GWF2_Bacteroidetes_35_48 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=GWA2_Bacteroidetes_31_9_curated
SCNpilot_cont_1000_p_scaffold_122_83
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(86853..87758)
DNA (906bp) protein (302aa)
N utilization substance protein B homolog n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI91_CHIPD
NusB antitermination factor; K03625 N utilization substance protein B
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_122_84
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(87874..89100)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S1R9_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:KGO92609.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
acyltransferase
SCNpilot_cont_1000_p_scaffold_122_85
Porphyromonas crevioricanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(89200..90141)
DNA (942bp) protein (314aa)
Alpha/beta hydrolase fold n=1 Tax=Porphyromonas crevioricanis JCM 15906 RepID=T1DTY9_9PORP
Alpha/beta hydrolase fold {ECO:0000313|EMBL:GAD06109.1}; TaxID=1305617 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas crevioricanis JCM 15906.;"
hydrolase, alpha/beta superfamily
SCNpilot_cont_1000_p_scaffold_122_86
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(90431..92011)
DNA (1581bp) protein (527aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Niabella soli DSM 19437 RepID=H1NNA1_9SPHI rbh
Major facilitator transporter {ECO:0000313|EMBL:AHF15328.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
EmrB/QacA subfamily drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B rbh
SCNpilot_cont_1000_p_scaffold_122_87
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(92037..93200)
DNA (1164bp) protein (388aa)
Secretion protein HlyD family protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PH77_CHIPD rbh
secretion protein HlyD family protein; K03543 multidrug resistance protein A rbh
Secretion protein HlyD family protein {ECO:0000313|EMBL:ACU58056.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_122_88
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(93231..94574)
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361BC91 rbh
outer membrane efflux protein rbh
Outer membrane efflux protein {ECO:0000313|EMBL:ACU58057.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_122_89
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(94580..95224)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003698F3A
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACT93245.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_cont_1000_p_scaffold_122_90
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(95321..97372)
DNA (2052bp) protein (684aa)
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
ATP-dependent DNA helicase RecG n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PR77_CHIPD
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:ACU64316.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Displaying items 61-90 of 147 in total

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