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SCNpilot_cont_1000_p_scaffold_122

Search features with annotation key words

Displaying items 121-147 of 147 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_122_121
unknown

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127408..127620
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_122_122
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(127727..129532)
DNA (1806bp) protein (602aa)
Xenobiotic-transporting ATPase {ECO:0000313|EMBL:AEV98424.1}; EC=3.6.3.44 {ECO:0000313|EMBL:AEV98424.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Xenobiotic-transporting ATPase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFJ3_NIAKG rbh
xenobiotic-transporting ATPase rbh
SCNpilot_cont_1000_p_scaffold_122_123
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

129723..130607
DNA (885bp) protein (295aa)
lipid A biosynthesis acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-]
Lipid A biosynthesis acyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCA3_NIAKG
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:AEW01410.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_122_124
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

130611..131621
DNA (1011bp) protein (337aa)
fatty acid desaturase; K10255 omega-6 fatty acid desaturase (delta-12 desaturase) [EC:1.14.19.-]
Fatty acid desaturase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCA4_NIAKG
Fatty acid desaturase {ECO:0000313|EMBL:AEW01411.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_122_125
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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131713..132873
DNA (1161bp) protein (387aa)
homogentisate 12-dioxygenase; K00451 homogentisate 1,2-dioxygenase [EC:1.13.11.5]
Homogentisate 12-dioxygenase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUU7_CHIPD
Homogentisate 12-dioxygenase {ECO:0000313|EMBL:ACU62856.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_122_126
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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133036..134166
DNA (1131bp) protein (377aa)
4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27); K00457 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] rbh
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Pedobacter agri RepID=UPI00029B36FD rbh
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:KIA93290.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
SCNpilot_cont_1000_p_scaffold_122_127
Acinetobacter gerneri, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134240..135268
DNA (1029bp) protein (343aa)
Uncharacterized protein n=2 Tax=Acinetobacter gerneri RepID=N8ZK19_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENV34069.1}; TaxID=1120926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter gerneri DSM 14967 = CIP 107464.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_122_128
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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135249..136007
DNA (759bp) protein (253aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003792};; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG62
truA; tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
tRNA pseudouridine synthase A n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRM5_CHIPD
SCNpilot_cont_1000_p_scaffold_122_129
unknown

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comp(136010..136327)
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_122_130
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(136394..137089)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EYC2_EMTOG rbh
protein of unknown function DUF125 transmembrane rbh
Uncharacterized protein {ECO:0000313|EMBL:AFK04675.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
SCNpilot_cont_1000_p_scaffold_122_131
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(137089..138324)
DNA (1236bp) protein (412aa)
ornithine aminotransferase; K00819 ornithine--oxo-acid transaminase [EC:2.6.1.13] rbh
Ornithine aminotransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDZ2_CHIPD rbh
Ornithine aminotransferase {ECO:0000313|EMBL:ACU61492.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_122_132
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138505..138885
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J2L1D0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL79033.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_122_133
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

139068..140975
DNA (1908bp) protein (636aa)
Mechanosensitive ion channel family protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FTI4_9FLAO rbh
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:EIA08388.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
mscS1; small-conductance mechanosensitive ionchannel MscS1 rbh
SCNpilot_cont_1000_p_scaffold_122_134
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

140979..142724
DNA (1746bp) protein (582aa)
Amino acid permease n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FWD7_9FLAO rbh
Amino acid permease {ECO:0000313|EMBL:EIA07212.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
amino acid permease rbh
SCNpilot_cont_1000_p_scaffold_122_135
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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142739..143560
DNA (822bp) protein (274aa)
Potassium efflux system KefA protein id=1900879 bin=GWE2_Bacteroidetes_32_14 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
small-conductance mechanosensitive channel
Tax=GWE2_Bacteroidetes_32_14_curated
SCNpilot_cont_1000_p_scaffold_122_136
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

143577..144497
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FWD9_9FLAO rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EIA07214.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_122_137
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(144500..145498)
DNA (999bp) protein (333aa)
Inward rectifier potassium channel n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CFS9_9FLAO rbh
Inward rectifier potassium channel Irk {ECO:0000313|EMBL:KGD68299.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
irk; inward rectifier potassium channel Irk; K08715 inward rectifier potassium channel rbh
SCNpilot_cont_1000_p_scaffold_122_138
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(145467..146915)
DNA (1449bp) protein (483aa)
Polysaccharide biosynthesis protein n=1 Tax=Thermosipho melanesiensis (strain BI429 / DSM 12029) RepID=A6LJX9_THEM4
Uncharacterized protein {ECO:0000313|EMBL:AHJ99346.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
polysaccharide biosynthesis protein
SCNpilot_cont_1000_p_scaffold_122_139
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(146887..147423)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Arcobacter butzleri JV22 RepID=E6L2W0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AHJ99347.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
transferase hexapeptide repeat containing protein
SCNpilot_cont_1000_p_scaffold_122_140
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(147420..149870)
DNA (2451bp) protein (817aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PE64_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:GAL83273.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_122_141
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

150095..152110
DNA (2016bp) protein (672aa)
Pyruvate dehydrogenase (acetyl-transferring), 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring); K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
Pyruvate dehydrogenase (Acetyl-transferring), 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) {ECO:0000313|EMBL:AEV96584.1}; EC=1.2.4.1 {ECO:0000313|EMBL:AEV96584.1};; EC=1.2.4.4 {ECO:0000313|EMBL:AEV96584.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Pyruvate dehydrogenase (Acetyl-transferring), 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLL5_NIAKG
SCNpilot_cont_1000_p_scaffold_122_142
unknown

Not on your lists

comp(152157..152330)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_122_143
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(152390..157708)
DNA (5319bp) protein (1773aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W1U9_DYAFD
peptidase S8/S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ACT95524.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_cont_1000_p_scaffold_122_144
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(157831..158517)
DNA (687bp) protein (229aa)
Two component transcriptional regulator, winged helix family id=4224204 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
winged helix family two component transcriptional regulator
Tax=GWA2_Bacteroidetes_30_7_curated
SCNpilot_cont_1000_p_scaffold_122_145
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

comp(158514..160061)
DNA (1548bp) protein (516aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000366BF05
histidine kinase
Tax=CG_Bacteroid_01
SCNpilot_cont_1000_p_scaffold_122_146
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

160208..161419
DNA (1212bp) protein (404aa)
Putative exported protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZQA3_9BACT
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
SCNpilot_cont_1000_p_scaffold_122_147
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(161532..163451)
DNA (1920bp) protein (640aa)
30S ribosomal protein S1 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMB8_CHIPD rbh
RNA binding S1 domain-containing protein; K02945 small subunit ribosomal protein S1 rbh
RNA binding S1 domain protein {ECO:0000313|EMBL:ACU64023.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Displaying items 121-147 of 147 in total

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