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SCNpilot_cont_1000_p_scaffold_122_128

Organism: SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 135249..136007

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003792};; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG62 similarity UNIPROT
DB: UniProtKB
  • Identity: 49.0
  • Coverage: 249.0
  • Bit_score: 259
  • Evalue 7.00e-66
truA; tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 248.0
  • Bit_score: 253
  • Evalue 6.60e-65
tRNA pseudouridine synthase A n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRM5_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 248.0
  • Bit_score: 253
  • Evalue 2.10e-64

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Taxonomy

Flavihumibacter sp. ZG627 → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 759
ATGGCAAGATACTTCCTTGAAGTAATGTATAATGGCACAGCCTTTAGCGGTTCGCAAATACAGGGCGAACAGGCCACGGTACAGCTTGCCCTCAACAATGCACTAAGTACGATACTGCGCGAACCTGTGGAAACATATGGCGCCAGCCGAACTGATGAAGGGGTACATGCGCTGGGCAATTACTATCATTTTGATACGGGCAAAGAACTCTGGGCCTCGTTTTTTTACAATCTTAACTCCATACTACCCGGCACCATCGCGGCAAGGAAAATATTCCAGGCCAATGACAGCGAGCTGAATGCCCGGTTTGCAGCACTTACACGGCGCTACCGCTACCGTATATACAACAGTAAAGATCCCTTCCTGCTGCAACGCGCCTTATACTTTCCCTTCAGGCTTGATACGGCACTACTGCAGCAGAGTGCAAAGGTCATCATGGAGTATGATAATTTCGAGACCTTCTCGAAGCGCAATACCCAGAGCAAGACCTTTATTTGTAAGATACACCAATCGTATTGGGAAGAAGTTGGTAAAGAACTGCACTACGTGGTAGAAGCCAATCGGTTTTTGCGTGGTATGGTGCGCGGGCTTGTGGGTACACAATTGCAAGTGGGGCGCGGCAGGATGAGTATGGAACAATTCCGGGAGGTTATAGAAGCACGTGATTGCACCTTAGCCGATTTTAGTGTAGACGGGCATGGACTGTATTTAGAACATATACAATACCCGGAAGACGTTTTAACGGAATTATTTGTGTAA
PROTEIN sequence
Length: 253
MARYFLEVMYNGTAFSGSQIQGEQATVQLALNNALSTILREPVETYGASRTDEGVHALGNYYHFDTGKELWASFFYNLNSILPGTIAARKIFQANDSELNARFAALTRRYRYRIYNSKDPFLLQRALYFPFRLDTALLQQSAKVIMEYDNFETFSKRNTQSKTFICKIHQSYWEEVGKELHYVVEANRFLRGMVRGLVGTQLQVGRGRMSMEQFREVIEARDCTLADFSVDGHGLYLEHIQYPEDVLTELFV*