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SCNpilot_cont_1000_p_scaffold_122

Search features with annotation key words

Displaying items 31-60 of 147 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_122_31
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


32758..35349
DNA (2592bp) protein (864aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
DNA gyrase subunit A; K02469 DNA gyrase subunit A [EC:5.99.1.3]
DNA gyrase subunit A n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUW6_CHIPD
SCNpilot_cont_1000_p_scaffold_122_32
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35390..36682
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUW5_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU62874.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_122_33
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

36770..37906
DNA (1137bp) protein (379aa)
fatty acid desaturase; K00508 linoleoyl-CoA desaturase [EC:1.14.19.3] rbh
Linoleoyl-CoA desaturase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JWI6_9BACT
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_cont_1000_p_scaffold_122_34
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37911..39119)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PE23_CHIPD rbh
hypothetical protein; K09003 hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU61523.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_122_35
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(39233..41560)
DNA (2328bp) protein (776aa)
Oxidoreductase alpha (Molybdopterin) subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PE32_CHIPD rbh
oxidoreductase alpha (molybdopterin) subunit rbh
Oxidoreductase alpha (Molybdopterin) subunit {ECO:0000313|EMBL:ACU61532.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_122_36
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(41557..41931)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000364152D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM71850.1}; TaxID=886377 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1).;"
SCNpilot_cont_1000_p_scaffold_122_37
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(41938..42786)
DNA (849bp) protein (283aa)
Formate dehydrogenase family accessory protein FdhD n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W105_9FLAO rbh
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
formate dehydrogenase family accessory protein FdhD; K02379 FdhD protein
SCNpilot_cont_1000_p_scaffold_122_38
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(42836..43324)
DNA (489bp) protein (163aa)
Molybdenum cofactor guanylyltransferase {ECO:0000256|SAAS:SAAS00049907}; EC=2.7.7.77 {ECO:0000256|SAAS:SAAS00049907};; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
SCNpilot_cont_1000_p_scaffold_122_39
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

43495..44331
DNA (837bp) protein (279aa)
Putative permease n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KU31_SOLCM
putative permease
Putative permease {ECO:0000313|EMBL:AFD07011.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_1000_p_scaffold_122_40
unknown

Not on your lists

comp(44442..44762)
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_122_41
unknown

Not on your lists

44790..45392
DNA (603bp) protein (201aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_122_42
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(45370..45972)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003693EC8
Uncharacterized protein {ECO:0000313|EMBL:KIC93654.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_122_43
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(46015..48129)
DNA (2115bp) protein (705aa)
Putative zinc-binding dehydrogenase n=1 Tax=Indibacter alkaliphilus LW1 PF6_9BACT">RepID=S2DPF6_9BACT rbh
Dehydrogenase {ECO:0000313|EMBL:EZH72299.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
oxidoreductase domain-containing protein rbh
SCNpilot_cont_1000_p_scaffold_122_44
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(48191..49327)
DNA (1137bp) protein (379aa)
Putative bi-domain oxidoreductase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JRZ1_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EZH72298.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
oxidoreductase domain-containing protein
SCNpilot_cont_1000_p_scaffold_122_45
Sulfurovum sp. AR, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49373..50503)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Sulfurovum sp. AR RepID=I2K7L7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EIF51219.1}; TaxID=1165841 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AR.;"
glycosyltransferase
SCNpilot_cont_1000_p_scaffold_122_46
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

50603..51691
DNA (1089bp) protein (363aa)
Glycosyl transferase, group 1 n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEM6_GEOUR
group 1 glycosyl transferase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_cont_1000_p_scaffold_122_47
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(51659..52669)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000368A5FB rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:AKD05362.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
short-chain dehydrogenase of unknown substrate specificity
SCNpilot_cont_1000_p_scaffold_122_48
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(52671..54194)
DNA (1524bp) protein (508aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JML3_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:ELR68637.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_122_49
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(54330..55211)
DNA (882bp) protein (294aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
Glucose-1-phosphate thymidylyltransferase n=3 Tax=Elizabethkingia RepID=T0NHQ6_ELIME rbh
glucose-1-phosphate thymidylyltransferase
SCNpilot_cont_1000_p_scaffold_122_50
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(55215..56264)
DNA (1050bp) protein (350aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] rbh
dTDP-glucose 4,6-dehydratase n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G0X6_9SPHI rbh
SCNpilot_cont_1000_p_scaffold_122_51
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(56267..57604)
DNA (1338bp) protein (446aa)
acetyl-CoA carboxylase, biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] rbh
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUB6_CHIPD rbh
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:ACU59156.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_122_52
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(57700..58185)
DNA (486bp) protein (162aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUB5_CHIPD
acetyl-CoA carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:ACU59155.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_122_53
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(58212..58778)
DNA (567bp) protein (189aa)
elongation factor P n=1 Tax=Segetibacter koreensis RepID=UPI00036AC1F5
translation elongation factor P; K02356 elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_122_54
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(58851..60080)
DNA (1230bp) protein (410aa)
imidazolonepropionase; K01468 imidazolonepropionase [EC:3.5.2.7] rbh
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 15749.;"
imidazolonepropionase n=1 Tax=Marinilabilia salmonicolor RepID=UPI000299F0F6 rbh
SCNpilot_cont_1000_p_scaffold_122_55
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(60156..61145)
DNA (990bp) protein (330aa)
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KN76_SOLCM rbh
putative oxidoreductase, aryl-alcohol dehydrogenase like protein rbh
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:AFD09409.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_1000_p_scaffold_122_56
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

61287..62960
DNA (1674bp) protein (558aa)
Peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase n=1 Tax=Niabella soli DSM 19437 RepID=H1NRE1_9SPHI rbh
Peptidase C45 {ECO:0000313|EMBL:AHF16541.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase rbh
SCNpilot_cont_1000_p_scaffold_122_57
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

63002..64207
DNA (1206bp) protein (402aa)
Glycosyl transferase family 2 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAZ6_CHIPD
Putative glycosyltransferase {ECO:0000313|EMBL:GAO42103.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
family 2 glycosyl transferase
SCNpilot_cont_1000_p_scaffold_122_58
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(64291..65148)
DNA (858bp) protein (286aa)
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Niabella soli DSM 19437 RepID=H1NPV4_9SPHI
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:KIC94940.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor
SCNpilot_cont_1000_p_scaffold_122_59
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

65499..66677
DNA (1179bp) protein (393aa)
acyl-CoA dehydrogenase domain-containing protein (EC:1.3.99.7); K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7]
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDK3_9SPHI
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:EHQ30212.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_1000_p_scaffold_122_60
Limnoraphis robusta, Limnoraphis, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(66734..67591)
DNA (858bp) protein (286aa)
Adenylate cyclase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P7H8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KKD39635.1}; TaxID=1637645 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Limnoraphis.;" source="Limnoraphis robusta CS-951.;"
putative ABC transporter substrate-binding protein
Displaying items 31-60 of 147 in total

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