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SCNpilot_cont_1000_p_scaffold_139_31

Organism: SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(31724..32416)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUG3_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 226.0
  • Bit_score: 380
  • Evalue 1.40e-102
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 226.0
  • Bit_score: 385
  • Evalue 4.50e-104
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 226.0
  • Bit_score: 380
  • Evalue 4.30e-103

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 693
ATGGCAACACTCACTAAAAAAAGAAAAGCTGTAGAAGCTAAACTCGATAAAAACAAGCAATATAATCTTGCTGACGCTGCCAAAATGGTGAAGGATATCAACTGCACCAAATTCGATAGCTCGGTAGATATGCACATACGCCTTGGGGTTGACCCCAAGAAGGCCGACCAGGCCATCCGCGGCACCGTTACACTGCCGCACGGTACTGGTAAAACCAAGCGCGTGCTGGTACTCTGCACTCCTGATAAGGAAGCAGAAGCGAAAGCAGCCGGCGCCGACTATGTAGGCCTCGACGAATTTGTACAAAAGATAGAAGGCGGCTGGACCGATGTGGACGTTATCGTGGCCACACCGGCAGTAATGCCTAAGATCGGTCGCCTTGGTAAAGTATTAGGTCCACGCAACCTGATGCCCAACCCCAAAACAGGCACTGTTACCAACGACGTAGCCACTGCGGTTACCGACGTTAAGGGTGGTAAAATAGCTTTCAAGATAGACAAAGCCGGTATCATACATGCTTCCATCGGCCGTGTATCCTTCGAGCCTAATAAAATAGCGGAAAATGCACAGGAACTGATCAATACCCTGGTGCGCATGAAGCCTTCCACAGCTAAGGGAACTTACCTGAAAGGCATCAGCATGGCATCAACCATGAGCCCGGGACTGATCATTGATACCAAAAGTGTTTCGTAA
PROTEIN sequence
Length: 231
MATLTKKRKAVEAKLDKNKQYNLADAAKMVKDINCTKFDSSVDMHIRLGVDPKKADQAIRGTVTLPHGTGKTKRVLVLCTPDKEAEAKAAGADYVGLDEFVQKIEGGWTDVDVIVATPAVMPKIGRLGKVLGPRNLMPNPKTGTVTNDVATAVTDVKGGKIAFKIDKAGIIHASIGRVSFEPNKIAENAQELINTLVRMKPSTAKGTYLKGISMASTMSPGLIIDTKSVS*