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SCNpilot_cont_1000_p_scaffold_139_47

Organism: SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(50258..50632)

Top 3 Functional Annotations

Value Algorithm Source
RRM domain-containing RNA-binding protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CK07_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 45.8
  • Coverage: 131.0
  • Bit_score: 104
  • Evalue 7.80e-20
RRM domain-containing RNA-binding protein {ECO:0000313|EMBL:EJL73134.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.8
  • Coverage: 131.0
  • Bit_score: 104
  • Evalue 1.10e-19
RNA-binding protein rbpA similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 121.0
  • Bit_score: 99
  • Evalue 1.00e-18

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Taxonomy

Chryseobacterium sp. CF314 → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 375
ATGAACCTGTTTGTAGGTAATTTAAGCCCTGAAACAAGCGAAAGCAGCCTGAGAACATTATTTGCACAGTTTGGAGAAATAGTGTCTGTAAAAATAATCATTGATGCAGCTACCGGCCTGCCTAAAGGTTTTGGTTTTGTGGAGATGGCTGATAAATTCCATTCTTACGATGCCGTTGACAACCTGGATATGACCTATTTCGAAGGTAGTGTCATTTCTGTTAAAGAAGCGAAGCAGAACAAGTCTGGTGGCGGTGGTGGTGGTCGTTTTGGCCGTGGTGGTGGTGGCAATCGCGGCGGCGGTGGTGGAAGCCGTTTCAGCGGTGGTGGCAACAGGCCCAATAGCGGCGGTTTCAACAGGCGCTTCAATTCATAA
PROTEIN sequence
Length: 125
MNLFVGNLSPETSESSLRTLFAQFGEIVSVKIIIDAATGLPKGFGFVEMADKFHSYDAVDNLDMTYFEGSVISVKEAKQNKSGGGGGGRFGRGGGGNRGGGGGSRFSGGGNRPNSGGFNRRFNS*