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SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241

SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_242
In projects: SCNPILOT_SOLID2_TRIM150  |  SCN_92

Consensus taxonomy: Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 101-150 of 324 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_solids2_trim150_scaffold_11007
Class: Actinobacteria (100%)
3 3646 bp 68.68 231.17 92.81
scnpilot_solids2_trim150_scaffold_747
Class: Actinobacteria (83.87%)
32 38797 bp 65.29 231.61 91.02
scnpilot_solids2_trim150_scaffold_8774
Species: Nakamurella multipartita (58.33%)
12 11015 bp 73.91 231.63 86.88
scnpilot_solids2_trim150_scaffold_9804
Class: Actinobacteria (100%)
3 2329 bp 68.53 231.67 94.16
scnpilot_solids2_trim150_scaffold_4049
Class: Actinobacteria (62.5%)
8 6543 bp 67.63 231.68 85.69
scnpilot_solids2_trim150_scaffold_22736
Species: Microlunatus phosphovorus (50%)
2 1227 bp 71.72 232.15 90.95
scnpilot_solids2_trim150_scaffold_5667
Class: Actinobacteria (54.55%)
11 7722 bp 65.03 232.44 81.12
scnpilot_solids2_trim150_scaffold_10279
Class: Actinobacteria (71.43%)
7 5851 bp 69.37 232.70 99.52
scnpilot_solids2_trim150_scaffold_3567
Class: Actinobacteria (77.78%)
9 6652 bp 66.24 232.80 92.99
scnpilot_solids2_trim150_scaffold_9828
Class: Actinobacteria (100%)
3 3422 bp 69.73 233.15 101.26
scnpilot_solids2_trim150_scaffold_8387
Genus: Actinoplanes (57.14%)
7 7704 bp 68.00 233.41 91.32
scnpilot_solids2_trim150_scaffold_5442
Species: Nakamurella multipartita (55.56%)
9 7767 bp 71.96 233.58 98.61
scnpilot_solids2_trim150_scaffold_6297
Class: Actinobacteria (60%)
10 8299 bp 66.83 233.68 80.58
scnpilot_solids2_trim150_scaffold_10343
Order: Micrococcales (55.56%)
9 8714 bp 70.76 233.76 72.02
scnpilot_solids2_trim150_scaffold_14973
Class: Actinobacteria (50%)
8 3707 bp 65.34 234.00 69.27
scnpilot_solids2_trim150_scaffold_8163
Class: Actinobacteria (71.43%)
7 6109 bp 69.09 234.49 68.90
scnpilot_solids2_trim150_scaffold_5172
Class: Actinobacteria (92.31%)
26 21048 bp 70.30 234.76 85.68
scnpilot_solids2_trim150_scaffold_3541
Class: Actinobacteria (72.73%)
11 10023 bp 67.76 235.42 86.23
scnpilot_solids2_trim150_scaffold_13478
Class: Actinobacteria (80%)
5 3462 bp 68.05 235.44 71.14
scnpilot_solids2_trim150_scaffold_7246
Class: Actinobacteria (77.78%)
9 9420 bp 69.56 235.46 83.85
scnpilot_solids2_trim150_scaffold_8380
Class: Actinobacteria (66.67%)
3 3010 bp 72.03 235.47 94.19
scnpilot_solids2_trim150_scaffold_5210
Order: Micrococcales (66.67%)
12 10689 bp 65.61 235.50 95.34
scnpilot_solids2_trim150_scaffold_19126
Species: Nakamurella multipartita (80%)
5 2975 bp 71.93 235.56 84.71
scnpilot_solids2_trim150_scaffold_3976
Class: Actinobacteria (75%)
16 18156 bp 69.82 235.67 84.57
scnpilot_solids2_trim150_scaffold_614
Class: Actinobacteria (72.22%)
37 37624 bp 67.03 235.80 85.42
scnpilot_solids2_trim150_scaffold_10054
Class: Actinobacteria (100%)
3 2281 bp 70.28 235.88 91.54
scnpilot_solids2_trim150_scaffold_5165
Order: Micrococcales (57.14%)
14 9664 bp 66.68 236.38 92.85
scnpilot_solids2_trim150_scaffold_6887
Species: Nakamurella multipartita (66.67%)
3 3180 bp 70.13 236.46 98.11
scnpilot_solids2_trim150_scaffold_5724
Class: Actinobacteria (100%)
8 5846 bp 69.76 236.60 91.96
scnpilot_solids2_trim150_scaffold_885
Class: Actinobacteria (78.57%)
56 45282 bp 66.64 236.88 89.43
scnpilot_solids2_trim150_scaffold_4784
Domain: Bacteria (85.71%)
7 6901 bp 66.67 236.99 90.90
scnpilot_solids2_trim150_scaffold_12514
Class: Actinobacteria (85.71%)
7 4216 bp 69.43 237.17 93.29
scnpilot_solids2_trim150_scaffold_3384
Class: Actinobacteria (100%)
15 15194 bp 70.40 237.27 93.98
scnpilot_solids2_trim150_scaffold_8473
Class: Actinobacteria (100%)
9 6284 bp 65.37 238.01 90.42
scnpilot_solids2_trim150_scaffold_1401
Class: Actinobacteria (81.48%)
27 27591 bp 70.08 238.38 87.63
scnpilot_solids2_trim150_scaffold_8474
Class: Actinobacteria (66.67%)
9 7571 bp 70.51 238.42 85.15
scnpilot_solids2_trim150_scaffold_7859
Species: Nakamurella multipartita (57.14%)
14 8528 bp 70.74 238.47 88.33
scnpilot_solids2_trim150_scaffold_2127
Species: Nakamurella multipartita (60%)
20 18219 bp 71.08 238.51 90.89
scnpilot_solids2_trim150_scaffold_4668
Class: Actinobacteria (87.5%)
8 11793 bp 69.13 238.67 90.89
scnpilot_solids2_trim150_scaffold_4578
Class: Actinobacteria (70%)
10 8065 bp 70.91 238.75 91.58
scnpilot_solids2_trim150_scaffold_2101
Species: Nakamurella multipartita (72.22%)
54 57654 bp 69.37 238.75 87.78
scnpilot_solids2_trim150_scaffold_20874
Species: Nakamurella multipartita (100%)
3 2448 bp 67.93 238.85 90.93
scnpilot_solids2_trim150_scaffold_2914
Order: Micrococcales (60%)
10 12114 bp 69.52 239.21 93.12
scnpilot_solids2_trim150_scaffold_798
Species: Nakamurella multipartita (63.93%)
61 66117 bp 70.73 239.34 90.98
scnpilot_solids2_trim150_scaffold_4174
Species: Nakamurella multipartita (55%)
20 17134 bp 70.06 239.43 87.28
scnpilot_solids2_trim150_scaffold_26827
Species: Arthrobacter nitrophenolicus (100%)
1 1428 bp 72.48 239.50 99.79
scnpilot_solids2_trim150_scaffold_12149
Class: Actinobacteria (50%)
4 4113 bp 72.14 239.61 65.72
scnpilot_solids2_trim150_scaffold_4094
Class: Actinobacteria (88.89%)
9 9394 bp 70.66 239.96 81.59
scnpilot_solids2_trim150_scaffold_6155
Class: Actinobacteria (57.14%)
7 4378 bp 72.04 239.97 82.91
scnpilot_solids2_trim150_scaffold_3910
Species: Nakamurella multipartita (83.33%)
6 5972 bp 67.01 240.10 93.18
Displaying items 101-150 of 324 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.