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SCN18_14_9_16_R2_B_scaffold_900_9

Organism: SCN18_14_9_16_R2_B_Alphaproteobacteria_64_15

near complete RP 39 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 9093..13268

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 1391.0
  • Bit_score: 2193
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NS32_AZOS1 similarity UNIREF
DB: UNIREF100
  • Identity: 77.9
  • Coverage: 1391.0
  • Bit_score: 2193
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 1391.0
  • Bit_score: 2193
  • Evalue 0.0

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4176
ATGACCGACCTGATCAACGTACTGGGCCAGCCGCAGGGCACCCCGACCTTCGACGAGATCCGGATCTCGATCGCCAGCCCCGAGCGTATCCGCGCCTGGAGCCACGGCGAGATCAAGAAGCCGGAGACCATCAACTACCGCACCTTCAAGCCGGAGCGGGACGGGCTGTTCTGTGCCCGCATCTTCGGACCGATCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCATGAAGTTCCGCGGCATCACCTGCGAGAAGTGCGGCGTCGAGGTGACGCTCACCAAGGTGCGCCGCGAGCGCATGGGCCACATCGAGCTTGCCTCGCCGGTGGCGCACATCTGGTTCTTGAAGTCGCTGCCGAGCCGCATCGGGCTCTTGCTCGACATGACGCTGCGCGACCTCGAGAAGATCCTCTACTTCGAGAACTATGTGGTGACCGAGCCCGGCCTCACGCCGCTCAAGTACCGCGAGCTCCTGAACGAGGACCAATATCTCAACGCCCTCGACGAGTATGGTGACGATGCCTTCCGCGCCGACATTGGCGCCGAGGCGATCCGCGCCATGCTGCAGGTGATCGACCTCAACGAGGAGCGCCCGCGGCTGCGTGAGGAATTGCGCGAGACGACGTCGGAGGCCAAGCGCAAGAAGCTTGTGAAGCGGCTGAAGCTGGTCGAAAGCTTCATCGAATCAGGCGCCCGTCCGGAGTGGATGATCCTCGAGCTGGTACCGGTGATCCCGCCCGAGCTGCGCCCGCTGGTGCCCCTCGACGGCGGCCGGTTCGCGACCTCGGACTTGAACGACCTCTATCGCCGCGTCATCAACCGCAACAACCGCCTGAAGCGTCTGATCGAGCTGCGGGCGCCCGACATCATCGTGCGCAATGAAAAGCGCATGCTGCAGGAGTCGGTGGACGCCCTGTTCGACAATGGCCGTCGCGGACGCGTCATCACCGGCGCCAACAAGCGCCCGCTGAAGTCTCTCTCCGACATGCTGAAGGGCAAGCAGGGCCGCTTCCGCCAGAATCTGCTCGGCAAACGCGTCGACTACTCGGGTCGTTCGGTGATCGTGGTTGGTCCCGAGCTCAAGCTGCACCAGTGCGGCCTGCCCAAGAAGATGGCGCTCGAGCTGTTCAAGCCGTTCATCTATTCGCGGCTGCAGAACTACGGCATGGCCAACACCATCAAGGCCGCCAAGCGCATGGTCGAGAAGGAACGGCCGGAGGTGTGGGATATCCTCGAAGAGGTGATCCGCGAGCATCCGGTGCTGCTGAACCGCGCACCGACGCTGCATCGTCTCGGCATCCAGGCCTTCGAGCCGGTGCTGATCGAGGGCAAGGCGATCCAGCTTCATCCGCTGGTCTGCACTGCCTTCAACGCCGATTTCGACGGCGACCAGATGGCGGTCCACGTGCCGTTGTCGCTGGAAGCACAGCTCGAGGCGCGCGTGCTCATGATGTCGACCAACAACATCCTGAGCCCGGCGTCCGGCAAGCCGATCATTGTGCCGAGCCAGGACATCGTGCTTGGCATCTACTACATCACGCTGGAGCGTGAGGGCGAGGCGGGCGAAGGCTCGCTGTTCTCCGACATCGGCGACCTCGAGCATGCGTTGCACAGCCGCACGCTTTCCATGCATGCCAGGATCAAGATGCGACTGGAGGCCTACGACGACAAGGGTGAGCTCGCCTCGCGCGTGGTCGAGACCACGCCGGGCCGCATCCTTCTCGCGCAGATCCTGCCCAAGCATCCCAGCCTGCCGTTCTCGCTGATCAACCGGCTGCTGACGAAGAAGGACTTGCAGAACGTCATCGACACCGTCTACCGCCACTGCGGCCAGAAGGAGACGGTGATCTTCGCCGATCGATTGATGGGTCTCGGCTTCTATCACGCCTGCCGCGCCGGCATTTCCTTCGGCAAGGATGACCTCGTCATTCCGTCCGCCAAGGAGAAGCTGGTCGGGCAGACCCAGAAGGAAGTGAAGGAGTACGAGCAGCAGTATCAGGACGGCCTGATCACCTCGGGTGAGAAGTACAACAAGGTGGTCGACGCCTGGTCGCGCTGCTCGGATCGCGTGGCCGACGAGATGATGAAGGGGATTTCCACGCCGCGGCCCGGGCGGCCGGTGAACTCGGTGTGGATGATGACCCATTCCGGTGCGCGTGGCTCGGCGACGCAGATGAAGCAGCTTGCCGGCATGCGCGGTCTGATGACCAAGCCGTCGGGCGAGATCATCGACACGCCGATCATCTCGAACTTCAAGGAAGGTCTGAGCGTGCTGGAGTACTTCAACTCCACCCACGGCGCCCGCAAGGGCCTGGCAGACACGGCGCTCAAGACGGCGAACTCGGGCTATCTGACCCGCCGCCTTGTCGACGTGGCGCAGGACTGCATCATCTTCGAAGAAGATTGCGGTACCGACCGCGGCCTCACCATGCGTGCCGTCGTCGACGGCGGAGACGTGATGGAGCCGCTCTCCGAGCGTGTGCTGGGCCGTACCGCGCTTGACGATGTGGTCGATCCGCTGAACGGCACGGTGATCGCCAAGAGCGGCGATTTGATCGACGAGGTCAAGGTCGAGCAGATCGAGAAGGCCGGCATCGAAGAGATGCGCATCCGCTCGGTGCTGACCTGCGACACCAAGACCGGCGTTTGCGGCAAGTGCTACGGGCGCGATCTCGCCCGCGGCACGCCGGTCAATATCGGCGAAGCGGTGGGCGTCATTGCCGCCCAGTCGATCGGCGAGCCGGGTACCCAGCTCACCATGCGTACCTTCCACATCGGCGGCGCCGCCCAACGTGGCGCCGAGCAGTCGAGCATCGAGGCGAGCCATGACGGCCGCATCCAGGTGCGCAACCGCAACGTGGTGGTCAACAGCCAAGGTGTGCCGGTGGTGATGGGCCGCAACACCGAGCTGGTGCTGATCGACGGTGCCCAGCGCGAGCGCGCCAAGCATCGCGTGCCGTACGGTGCGCGCCTGCTGGTCGACAACGACGCGCCCGTCGCCAAGGGCCAGAAGCTCGCGGAGTGGGATCCGTACACCCTGCCGATCATCACCGAGAAGGCGGGTAGGGCAGTCTACGTCGACCTCGTCGAGGGCGTGTCGATGCGCGAGGTGATCGACGATTCGACCGGCATCTCCAACCGCGTCGTCGTCGACTGGAAGGGCCAGCCGCGCGGCGGCGATCTGCGTCCGCGTATCGCCATCCACGACGCCGGGGGCAACCCGGTGATGCTGGCCAACGGTCAGGAAGCTCGCTACCTGCTGTCGCTCGATTCGGTGCTTTCGGTCGAGAACGGTCAGGAGGTCCATGCCGGCGACATCCTCGCGCGTATCCCGCGTGAGGGCGGCAAGAACCGCGACATCACGGGCGGTCTGCCGCGCGTGGCCGAGCTGTTCGAGGCGCGCAAGCCCAAGGACTTCGCGATCATCTGCGACGTTGCGGGCCGCATCGAGTTCGGCAAGGACTACAAGAACAAGCGCCGCATCCTGATCGTGCCGGAAGGCGAGGGTGCGGAGCCGGTCGAGTACCTGATCCCGAAGGGCAAGCGCATCGCGGTTCAGGAAGGCGACTACGTAGAGCGCGGCGATCTCCTGATCGACGGCAACCCGGTGCCGCACGACATCCTGCGCGTGCTGGGTATCGAGAAGCTGGCCGAATATCTCGTGAACGAGATTCAGGAGGTCTATCGGCTGCAGGGCGTGAAGATCAACGACAAGCACATCGAGACGATCGCGCGTCAGATGCTGCAGAAGGTCGAGATCACCGACGCCGGCGACTCGACCTTCCTGATCGGCGAGCAAGTCGACAAGGGCGAGTTCGAGATCGAGAACGCCAAGCTCGTGTCGGAGAAGCTGAAGCCCGCCAAGTCCGATCCGGTACTGCTCGGCATCACCAAGGCGAGCCTGCAGACCAAGTCGTTCATCTCGGCGGCCTCCTTCCAGGAGACCACCCGCGTGCTGACCGAGGCGGCCGTCTCCGGCCGCGTCGACACCCTTCAGGGTCTGAAGGAGAACGTGATCGTCGGCCGGCTCATTCCGGCCGGCACCGGCGGCGTGGTGAACCGGCTGAAGGCGATTGCCGCCCAGCGCGACCGGGCGATCCTGGCGGCTGGCGCGGACGGCGAGGACGAGCCCGTCCCGACCCTCGAGCAGGCCGATCGCGCAGCCGACTGA
PROTEIN sequence
Length: 1392
MTDLINVLGQPQGTPTFDEIRISIASPERIRAWSHGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMKFRGITCEKCGVEVTLTKVRRERMGHIELASPVAHIWFLKSLPSRIGLLLDMTLRDLEKILYFENYVVTEPGLTPLKYRELLNEDQYLNALDEYGDDAFRADIGAEAIRAMLQVIDLNEERPRLREELRETTSEAKRKKLVKRLKLVESFIESGARPEWMILELVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKRMLQESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKKMALELFKPFIYSRLQNYGMANTIKAAKRMVEKERPEVWDILEEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILSPASGKPIIVPSQDIVLGIYYITLEREGEAGEGSLFSDIGDLEHALHSRTLSMHARIKMRLEAYDDKGELASRVVETTPGRILLAQILPKHPSLPFSLINRLLTKKDLQNVIDTVYRHCGQKETVIFADRLMGLGFYHACRAGISFGKDDLVIPSAKEKLVGQTQKEVKEYEQQYQDGLITSGEKYNKVVDAWSRCSDRVADEMMKGISTPRPGRPVNSVWMMTHSGARGSATQMKQLAGMRGLMTKPSGEIIDTPIISNFKEGLSVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVAQDCIIFEEDCGTDRGLTMRAVVDGGDVMEPLSERVLGRTALDDVVDPLNGTVIAKSGDLIDEVKVEQIEKAGIEEMRIRSVLTCDTKTGVCGKCYGRDLARGTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQRGAEQSSIEASHDGRIQVRNRNVVVNSQGVPVVMGRNTELVLIDGAQRERAKHRVPYGARLLVDNDAPVAKGQKLAEWDPYTLPIITEKAGRAVYVDLVEGVSMREVIDDSTGISNRVVVDWKGQPRGGDLRPRIAIHDAGGNPVMLANGQEARYLLSLDSVLSVENGQEVHAGDILARIPREGGKNRDITGGLPRVAELFEARKPKDFAIICDVAGRIEFGKDYKNKRRILIVPEGEGAEPVEYLIPKGKRIAVQEGDYVERGDLLIDGNPVPHDILRVLGIEKLAEYLVNEIQEVYRLQGVKINDKHIETIARQMLQKVEITDAGDSTFLIGEQVDKGEFEIENAKLVSEKLKPAKSDPVLLGITKASLQTKSFISAASFQETTRVLTEAAVSGRVDTLQGLKENVIVGRLIPAGTGGVVNRLKAIAAQRDRAILAAGADGEDEPVPTLEQADRAAD*