ggKbase home page

SCN18_25_1_16_R1_B_scaffold_617_20

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: comp(17156..18796)

Top 3 Functional Annotations

Value Algorithm Source
Peptide ABC transporter, ATP-binding protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N3K5_RHOPA similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 542.0
  • Bit_score: 926
  • Evalue 1.20e-266
peptide ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 543.0
  • Bit_score: 926
  • Evalue 3.40e-267
Putative oligopeptide transport protein (ABC superfamily, atp_bind) {ECO:0000313|EMBL:CAL74921.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 543.0
  • Bit_score: 926
  • Evalue 1.70e-266

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1641
ATGGACGCGATCAACCAGCCGCTGCTCGATGTCCGCGATCTTTCGGTCGCGTTCGGCCAGGGCGAGCGGGCGACACTTGCGGTGGACCGCATCTCCTACACCATGCGGCGCGGCGAATGCGTCGCGCTGGTGGGTGAATCCGGCTCCGGCAAATCGGTCAGCGCGCTGTCGATCCTGAAGCTGTTGCCCTATCCCAGCGCGTCGCATCCCTCGGGCACGATCCGCTTCAAGGGGCAGGACCTGCTGACGGCCTCTGAACGCGAGATGCGCGGTATTCGCGGCAACGATATCTCGATCATCTTTCAGGAGCCGATGACTTCGCTCAATCCGCTCCACACCATTGAGGCGCAGATCGCGGAGATCATCCAGTTGCACGCGCCGCTGCGCGGCAGTGCGATCCGCGCGCGGGTGCTGGAATTGTTGACGCAGGTGGGCATCCCCGAACCGGAAACGCGGCTCGGCAGCTATCCGCATCAGCTCTCCGGCGGGCAGCGCCAGCGTGTGATGATTGCGATGGCGCTCGCCAATGAGCCGGACCTGTTGATCGCCGACGAGCCGACCACCGCGCTCGACGTCACCGTGCAGGCGCAGATCCTGCAATTGCTGGCGGACATCCGCGCGCGGCTCGGCATGAGCATGTTGTTTATCACCCATGATCTCGGCATCGTGCGCCGCATCGCCGACGTGGTCTGCGTGATGAACCACGGTAAGATCGTCGAGCAGGGGCCGGTGGAGCAGGTGTTCACCGCGCCTCAGCATTCCTACACGAAGGCGCTGCTCGCGGCCGAGCCGAAGCCGGACCCCGCGCCGCCGCAGCACGACGCGCCGGTGGTGATGCAGGCGACCGATCTCAAGGTGTGGTTTCCGATCAAGCGCGGGCTCTTGCGCAAGACCGTCGGCCACATCAAGGCAGTGGATGGTGTGACACTAGCGGTGCGGCGTGGCGAGACGCTCGGCGTGGTCGGTGAATCCGGCTCCGGCAAGACCACGCTCGGACTGGCGCTGCTGCGATTGATTTCCTCCGATGGCCCCATCGTGTTTCTCGGCAAGGACATTCAGGGCCTGCGCTTCAAGGCGATGCGGCCGTTCCGCCGCGACATGCAGATCGTGTTTCAGGACCCGTTCGGATCGTTGAGCCCGCGCATGTCGGTGGGCGATATCATCGCCGAAGGCTTGAGCGTGCATCAGCCACAACTGTCGCAGGAGCAACGCGAGGCGCGGGTGGTGAAGGCGCTGGTCGATGCCGGGCTCGATCCGGCGACGCGTTTCCGCTATCCGCATGAGTTCTCCGGCGGCCAGCGCCAGCGCATCAGCATCGCCCGCGCCGTGGTGCTGGAGCCGAGCTTCATCGTGCTGGACGAACCGACCAGCGCGCTCGACATGCTGTTGCAGGCGCAGATGGTTGATCTGCTGCGCGATCTGCAACGCAAGCGCGATCTCACTTATATGTTCATCTCGCACGACCTGCGTGTGGTGGCGTCATTGGCAAGCCATCTCATCGTGATGCGTCACGGCAAGGTGGTGGAGGAGGGGCCGGCGTCGGAATTGTTCAAGAACCCGAAGACGGATTACACCCGCGCGCTGTTCGCCGCCGCCTTCCGGCTGGAAACCGCAAACGGCGCGGGCGACGTCGATGGCTGA
PROTEIN sequence
Length: 547
MDAINQPLLDVRDLSVAFGQGERATLAVDRISYTMRRGECVALVGESGSGKSVSALSILKLLPYPSASHPSGTIRFKGQDLLTASEREMRGIRGNDISIIFQEPMTSLNPLHTIEAQIAEIIQLHAPLRGSAIRARVLELLTQVGIPEPETRLGSYPHQLSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILQLLADIRARLGMSMLFITHDLGIVRRIADVVCVMNHGKIVEQGPVEQVFTAPQHSYTKALLAAEPKPDPAPPQHDAPVVMQATDLKVWFPIKRGLLRKTVGHIKAVDGVTLAVRRGETLGVVGESGSGKTTLGLALLRLISSDGPIVFLGKDIQGLRFKAMRPFRRDMQIVFQDPFGSLSPRMSVGDIIAEGLSVHQPQLSQEQREARVVKALVDAGLDPATRFRYPHEFSGGQRQRISIARAVVLEPSFIVLDEPTSALDMLLQAQMVDLLRDLQRKRDLTYMFISHDLRVVASLASHLIVMRHGKVVEEGPASELFKNPKTDYTRALFAAAFRLETANGAGDVDG*