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SCN18_25_1_16_R1_B_scaffold_617_21

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: comp(18808..19986)

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WRV7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 391.0
  • Bit_score: 708
  • Evalue 2.80e-201
ABC transporter permease {ECO:0000313|EMBL:ETR77365.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 387.0
  • Bit_score: 712
  • Evalue 2.80e-202
binding-protein dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 389.0
  • Bit_score: 708
  • Evalue 8.00e-202

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
ATGTCGCTTCCCGCTCGCGAACCCATCGAGACCACCACCGTGGCCCCGCTCGGCGACGTGGTGCCGCCGTCGTCGCATCGACTGTCGCTATCGCCGATCAATCGCCGCCGCTGGCAGAATTTCAAAGCCAACCGGCGCGGTTACTGGTCGCTGTGGATCTTCTCGATCCTGTTCGTCGTCTCGCTGTTTGCCGAGGTGATCGCCAACGACCGGCCGTTCTTCATTTCTTACGACGGGCACTGGTACTGGCCCGCCTTCGTCACCTATTCGGAAACGACGTTCGGCGGCGATTTCGAGACCGCGGCCGACTATCGCGATCCGTATTTGCAGAAGCAGATCGCGGCGAAGGGCGGCACCGTGTTGTGGCCGCCGATCCGCTATTCCTACGACACCCACAATCTCGACCTGCCGACGCCGGCGCCCTCAAAACCGACGTGGCTGCTAACCGAGGCCGAATGCAAGAGCGTGGTCGAGAAGAAGGGCCTGCATGGCTGCCGCGATCTCGAATACAACTGGCTCGGCACCGACGATCAGGGCCGCGACGTGGTGGCGCGGTTGATCTACGGCTTCCGCATCTCGGTGCTGTTCGGGCTGTGCCTCACCATCGTCTCGTCGGTAATCGGCATCGCCGCCGGCGGCGTGCAGGGCTATTTCGGCGGCTGGGTCGATCTCGCCTTCCAGCGATTCATCGAAGTGTGGACCGCGATTCCCTCGCTGTATCTGCTGCTGATCCTGTCATCGATATTGGTGCCCGGCTTCTTCGTGCTGCTCGGCACGCTGCTGCTGTTCTCATGGGTGTCGCTGGTGGGATTGGTACGCGCGGAATTTTTGCGCGGCCGCAACTTCGAATACATCCAGGCGGCGCGCGCGCTCGGCGTTTCCAACAAGGTCATCATGTTCCGCCACCTGCTGCCGAACGCGATGGTGGCGACCATGACCTTCCTGCCGTTCATCGTCTCGTCATCGGTGATGACGCTCACCGCGCTGGATTTCCTCGGTTTCGGCCTGCCGCCCGGCTCGCCCTCGCTCGGCGAAATGCTGTCGCAGGGCAAGGCCAACGTGCAGGCGCCGTGGCTCGGCTTCACCGGCTTCTTCTCGCTGGCGATCATGCTGTCACTGCTGATCTTCATCGGCGAAGCGGTGCGTGACGCCTTCGACCCGCGCAAGACGTTCAGTTGA
PROTEIN sequence
Length: 393
MSLPAREPIETTTVAPLGDVVPPSSHRLSLSPINRRRWQNFKANRRGYWSLWIFSILFVVSLFAEVIANDRPFFISYDGHWYWPAFVTYSETTFGGDFETAADYRDPYLQKQIAAKGGTVLWPPIRYSYDTHNLDLPTPAPSKPTWLLTEAECKSVVEKKGLHGCRDLEYNWLGTDDQGRDVVARLIYGFRISVLFGLCLTIVSSVIGIAAGGVQGYFGGWVDLAFQRFIEVWTAIPSLYLLLILSSILVPGFFVLLGTLLLFSWVSLVGLVRAEFLRGRNFEYIQAARALGVSNKVIMFRHLLPNAMVATMTFLPFIVSSSVMTLTALDFLGFGLPPGSPSLGEMLSQGKANVQAPWLGFTGFFSLAIMLSLLIFIGEAVRDAFDPRKTFS*