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SCN18_30_10_14_R1_B_scaffold_3974

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_3974_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..832
DNA (831bp) protein (277aa)
Putative membrane protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IN52_9SPHN
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:BAK65500.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3974_2
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1017..1706
DNA (690bp) protein (230aa)
Putative oxygenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IN51_9SPHN
putative oxygenase
Putative oxygenase {ECO:0000313|EMBL:BAK65499.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3974_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1873..2349
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IN50_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65498.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3974_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2520..4343
DNA (1824bp) protein (608aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IN49_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65497.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3974_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4524..4964
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMB1_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65366.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3974_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5061..6647)
DNA (1587bp) protein (529aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Lysine--tRNA ligase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMB0_9SPHN
lysK; lysyl-tRNA synthetase class I
SCN18_30_10_14_R1_B_scaffold_3974_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6784..7152
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMA9_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65364.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3974_8
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7473..9956
DNA (2484bp) protein (828aa)
Putative ATP-dependent helicase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMA8_9SPHN
putative ATP-dependent helicase
Putative ATP-dependent helicase {ECO:0000313|EMBL:BAK65363.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3974_9
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9953..10504
DNA (552bp) protein (184aa)
Phosphohistidine phosphatase SixA n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMA7_9SPHN
phosphohistidine phosphatase SixA
Phosphohistidine phosphatase SixA {ECO:0000313|EMBL:BAK65362.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3974_10
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10531..10995)
DNA (465bp) protein (155aa)
Putative MerR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMA6_9SPHN
putative MerR family transcriptional regulator
Putative MerR family transcriptional regulator {ECO:0000313|EMBL:BAK65361.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3974_11
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11043..11408)
DNA (366bp) protein (122aa)
Integration host factor subunit alpha n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMA5_9SPHN
ihfA; integration host factor subunit alpha
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Displaying 11 items

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