Consensus taxonomy: Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria
Extracted from SCN18_14_9_16_R1_B_abawaca_094
contig | # features | sequence size | GC content (%) | Cov | Coding Density (%) | |
---|---|---|---|---|---|---|
SCN18_14_9_16_R1_B_scaffold_6090
Species:
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
|
6 | 7242 bp | 65.04 | 9.49 | 88.40 | |
SCN18_14_9_16_R1_B_scaffold_6353
Species:
SCNPILOT_CONT_500_BF_Rhizobiales_63_22 (60%)
|
5 | 4456 bp | 66.81 | 9.49 | 99.71 | |
SCN18_14_9_16_R1_B_scaffold_11660
Order:
Rhizobiales (66.67%)
|
6 | 2434 bp | 66.68 | 9.49 | 82.09 | |
SCN18_14_9_16_R1_B_scaffold_4279
Order:
Rhizobiales (62.5%)
|
8 | 10322 bp | 67.52 | 9.49 | 91.67 | |
SCN18_14_9_16_R1_B_scaffold_5674
Species:
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
|
9 | 6952 bp | 65.98 | 9.49 | 91.96 | |
SCN18_14_9_16_R1_B_scaffold_2203
Order:
Rhizobiales (84.62%)
|
13 | 12400 bp | 67.33 | 9.48 | 81.99 | |
SCN18_14_9_16_R1_B_scaffold_3528
Order:
Rhizobiales (77.78%)
|
9 | 7437 bp | 65.66 | 9.48 | 93.10 | |
SCN18_14_9_16_R1_B_scaffold_16484
Species:
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (50%)
|
2 | 1662 bp | 65.70 | 9.48 | 95.13 | |
SCN18_14_9_16_R1_B_scaffold_6401
Species:
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
|
6 | 4429 bp | 68.73 | 9.48 | 97.95 | |
SCN18_14_9_16_R1_B_scaffold_7318
Species:
SCNPILOT_CONT_500_BF_Rhizobiales_63_22 (75%)
|
4 | 3893 bp | 66.81 | 9.48 | 91.32 | |
SCN18_14_9_16_R1_B_scaffold_2918
Species:
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (50%)
|
12 | 9675 bp | 66.10 | 9.47 | 87.75 | |
SCN18_14_9_16_R1_B_scaffold_2800
Species:
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (58.33%)
|
12 | 8968 bp | 64.66 | 9.47 | 87.63 | |
SCN18_14_9_16_R1_B_scaffold_27274
Species:
Shinella sp. DD12 (50%)
|
2 | 1014 bp | 68.05 | 9.47 | 93.79 | |
SCN18_14_9_16_R1_B_scaffold_15004
Species:
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (100%)
|
2 | 1837 bp | 65.87 | 9.47 | 83.45 | |
SCN18_14_9_16_R1_B_scaffold_7175
Species:
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 (100%)
|
3 | 3979 bp | 66.05 | 9.46 | 94.40 | |
SCN18_14_9_16_R1_B_scaffold_5224
Species:
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
|
8 | 5374 bp | 64.91 | 9.46 | 88.65 | |
SCN18_14_9_16_R1_B_scaffold_12137
Species:
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 (75%)
|
4 | 2331 bp | 65.77 | 9.46 | 92.02 | |
SCN18_14_9_16_R1_B_scaffold_8802
Species:
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 (50%)
|
2 | 3255 bp | 67.86 | 9.45 | 90.51 | |
SCN18_14_9_16_R1_B_scaffold_3609
Order:
Rhizobiales (55.56%)
|
9 | 7315 bp | 65.13 | 9.45 | 95.89 | |
SCN18_14_9_16_R1_B_scaffold_6752
Species:
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (100%)
|
2 | 4208 bp | 67.73 | 9.45 | 97.24 | |
SCN18_14_9_16_R1_B_scaffold_12299
Order:
Rhizobiales (100%)
|
3 | 2289 bp | 66.36 | 9.44 | 94.89 | |
SCN18_14_9_16_R1_B_scaffold_5281
Species:
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (57.14%)
|
7 | 5321 bp | 66.28 | 9.44 | 90.08 | |
SCN18_14_9_16_R1_B_scaffold_19323
Species:
SCNPILOT_CONT_500_BF_Rhizobiales_63_22 (100%)
|
1 | 1414 bp | 66.76 | 9.44 | 99.93 | |
SCN18_14_9_16_R1_B_scaffold_8660
Species:
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (75%)
|
4 | 3305 bp | 67.81 | 9.44 | 95.76 | |
SCN18_14_9_16_R1_B_scaffold_13844
Species:
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (75%)
|
4 | 2003 bp | 65.15 | 9.44 | 86.12 | |
SCN18_14_9_16_R1_B_scaffold_1592
Species:
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
|
11 | 13828 bp | 65.31 | 9.43 | 91.62 | |
SCN18_14_9_16_R1_B_scaffold_3863
Order:
Rhizobiales (90.91%)
|
11 | 6945 bp | 64.51 | 9.42 | 77.97 | |
SCN18_14_9_16_R1_B_scaffold_4826
Species:
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (100%)
|
2 | 5763 bp | 67.01 | 9.42 | 94.27 | |
SCN18_14_9_16_R1_B_scaffold_5014
Species:
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (75%)
|
8 | 5565 bp | 66.00 | 9.41 | 92.83 | |
SCN18_14_9_16_R1_B_scaffold_11910
Order:
Rhizobiales (66.67%)
|
3 | 2376 bp | 68.27 | 9.41 | 90.78 | |
SCN18_14_9_16_R1_B_scaffold_6972
Species:
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (60%)
|
5 | 4081 bp | 66.43 | 9.41 | 90.42 | |
SCN18_14_9_16_R1_B_scaffold_7134
Species:
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (80%)
|
5 | 4003 bp | 64.63 | 9.41 | 94.50 | |
SCN18_14_9_16_R1_B_scaffold_7128
Species:
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
|
6 | 4006 bp | 66.53 | 9.40 | 87.54 | |
SCN18_14_9_16_R1_B_scaffold_15579
Species:
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 (50%)
|
4 | 2733 bp | 69.63 | 9.39 | 91.77 | |
SCN18_14_9_16_R1_B_scaffold_1969
Order:
Rhizobiales (96.3%)
|
27 | 23115 bp | 65.78 | 9.39 | 86.79 | |
SCN18_14_9_16_R1_B_scaffold_27437
Species:
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (50%)
|
2 | 1008 bp | 66.57 | 9.38 | 99.40 | |
SCN18_14_9_16_R1_B_scaffold_6487
Species:
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
|
4 | 4366 bp | 68.12 | 9.38 | 91.46 | |
SCN18_14_9_16_R1_B_scaffold_4673
Species:
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
|
3 | 5907 bp | 63.21 | 9.37 | 88.57 | |
SCN18_14_9_16_R1_B_scaffold_7138
Species:
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (50%)
|
4 | 4002 bp | 65.69 | 9.37 | 86.66 | |
SCN18_14_9_16_R1_B_scaffold_6774
Order:
Rhizobiales (100%)
|
7 | 4196 bp | 66.90 | 9.37 | 96.02 | |
SCN18_14_9_16_R1_B_scaffold_14153
Species:
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (50%)
|
2 | 1955 bp | 64.81 | 9.36 | 99.90 | |
SCN18_14_9_16_R1_B_scaffold_17207
Species:
SCNPILOT_EXPT_1000_BF_Devosia_62_26 (50%)
|
2 | 1589 bp | 72.69 | 9.35 | 99.69 | |
SCN18_14_9_16_R1_B_scaffold_8193
Order:
Rhizobiales (66.67%)
|
3 | 3482 bp | 64.85 | 9.35 | 85.12 | |
SCN18_14_9_16_R1_B_scaffold_13513
Species:
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (100%)
|
1 | 2054 bp | 66.99 | 9.35 | 95.52 | |
SCN18_14_9_16_R1_B_scaffold_4502
Species:
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (50%)
|
6 | 6901 bp | 66.53 | 9.35 | 87.60 | |
SCN18_14_9_16_R1_B_scaffold_13276
Species:
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
|
4 | 4030 bp | 62.56 | 9.34 | 66.55 | |
SCN18_14_9_16_R1_B_scaffold_2411
Order:
Rhizobiales (76%)
|
25 | 19990 bp | 67.17 | 9.33 | 88.95 | |
SCN18_14_9_16_R1_B_scaffold_3773
Order:
Rhizobiales (100%)
|
8 | 7061 bp | 65.19 | 9.33 | 94.92 | |
SCN18_14_9_16_R1_B_scaffold_4920
Order:
Rhizobiales (50%)
|
10 | 5660 bp | 64.84 | 9.33 | 81.86 | |
SCN18_14_9_16_R1_B_scaffold_3825
Species:
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
|
6 | 6993 bp | 64.45 | 9.33 | 96.22 |