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SCN18_30_10_14_R2_B_scaffold_3317

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_3317_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..759)
DNA (759bp) protein (253aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3I292_9RHIZ
SCN18_30_10_14_R2_B_scaffold_3317_2
unknown

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comp(1016..1333)
DNA (318bp) protein (106aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_3317_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1693..1995)
DNA (303bp) protein (101aa)
UPI0003CE0390 related cluster n=1 Tax=unknown RepID=UPI0003CE0390
Uncharacterized protein {ECO:0000313|EMBL:ESW93361.1}; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC269B00.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_3317_4
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2594..3739)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DAE5_BRAJP
Bradyrhizobium elkanii strain UASWS1015 Contig164, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51583.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
lactate dehydrogenase
SCN18_30_10_14_R2_B_scaffold_3317_5
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3760..5028)
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00035FF824
Fuconate dehydratase {ECO:0000313|EMBL:KHJ55787.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase
SCN18_30_10_14_R2_B_scaffold_3317_6
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5298..5747)
DNA (450bp) protein (150aa)
UPI0003D0234D related cluster n=1 Tax=unknown RepID=UPI0003D0234D
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
universal stress protein
SCN18_30_10_14_R2_B_scaffold_3317_7
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5995..6627)
DNA (633bp) protein (211aa)
UPI0003CE1875 related cluster n=1 Tax=unknown RepID=UPI0003CE1875
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
sigma-70 family RNA polymerase sigma factor
SCN18_30_10_14_R2_B_scaffold_3317_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6788..7540)
DNA (753bp) protein (251aa)
UPI0003CF1FCC related cluster n=1 Tax=unknown RepID=UPI0003CF1FCC
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:ESY68348.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
putative Crp/Fnr family transcriptional regulator
SCN18_30_10_14_R2_B_scaffold_3317_9
unknown

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7930..8181
DNA (252bp) protein (84aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_3317_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8730..9551
DNA (822bp) protein (274aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
UPI0003CF1FD4 related cluster n=1 Tax=unknown RepID=UPI0003CF1FD4
PAS/PAC sensor signal transduction histidine kinase
SCN18_30_10_14_R2_B_scaffold_3317_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9668..9934
DNA (267bp) protein (89aa)
Response regulator receiver protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LWD1_METRJ
response regulator
Response regulator receiver protein {ECO:0000313|EMBL:ACB22633.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
Displaying 11 items

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