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cn_combo_scaffold_338_31

Organism: CN-SCN_Comamonas_56x

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 14 / 38 MC: 1
Location: comp(29225..30694)

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion protein n=1 Tax=Ralstonia sp. PBA RepID=I9KY93_9RALS similarity UNIREF
DB: UNIREF100
  • Identity: 31.4
  • Coverage: 494.0
  • Bit_score: 196
  • Evalue 7.70e-47
Type III secretion protein {ECO:0000313|EMBL:EIZ05335.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA. similarity UNIPROT
DB: UniProtKB
  • Identity: 31.4
  • Coverage: 494.0
  • Bit_score: 196
  • Evalue 1.10e-46
Type III secretion inner membrane protein YscD similarity KEGG
DB: KEGG
  • Identity: 30.6
  • Coverage: 481.0
  • Bit_score: 165
  • Evalue 5.40e-38

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Taxonomy

Ralstonia sp. PBA → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1470
ATGAGCGCCCGCCCCCAGCCCGATCCGCAAGCCGCCAACGACGCCGACAGCGCGGCTGAGCTGCGCATCCTCTCGGGCTGCCATGCAGGAGCACGCGCACCCGCCACCGAGGCGCTGCGCCTCGGAGCGGGCGACGACTGCGACATCATCCTGAACGACATCGATCTGCCCGAGGGCGCGAGCATTCGCCTGCAGGTGAGTCGCGAACACTGGAGCGCGCGCCAGGACCCGATGGCGGCGGCCCACGAAGCCGACGAGCCCATAGCCCACCAAGCCTGGGGGGAGCCTGCGACCGTCGGCGGCATCACCCTCACCGTGTGCGCGCCGCGCAGCGCGTGGCCGGCATTGGCGCGGGCCTTGCCCGAGACATCGGCCAACGACGCCCGGCCGCCGCTCCTGCCCCAGCTCGCCCCCCTGCCCGCCACCGCGGCGGATGCTAGCACCGTGACAGCCCCGGCACTCACGGGCGATGCCGAGGCCGCCCCCGACGACAATCCCGCTCCCGAGCCCGCAGCCAGCCGCCCCAGCGCAAGCCGGATCGCCTTGCTGCTGGGTTCCATTCTTGTCGTTTTTCTCCTCGCTGCCGTGCTGGCGCTGTGGCTATGGCAAGACCGATCCAGGCCCTTGCCCGAGACAACGCCCGTGGCCGACACGCGCCCGGTGGACGCCGCCGCGCAGCAGCTGTGGCTGCGCAATGCCCGGCAGGCGCTGGCTGGCGTCGATCCCGCGCTGCGGCTGGACATGGCCCCCCTGCCGGATGGCCGCATCCGCGTGGCCGGATGGGTATCCGACATCAAGCAGCTGGACCAGGTCGTGGAGGCTCTGGGGCGTCTGCAGCCCGCGCCGGTACTGGCCTTGCGCACCACGGCGGATCTTTTCGATGAACTCAGCTCGGTGGCCAATGCGCAGGGCGCAGTCATCCACTTGGAGCTGGCGGGTGCCGGGCGCATACGCGTCACGGGCGCGCTGCAGGCCGAGCAGGAACACACCCAGGTGCTTGAAAAGCTGCGCGAGCGCATTCCCGCCGGAGTGGACCTGGTCGATGGTCTGCGCGTCGCCGAAACCGCCGCACCCAGCGTGCAGCAATGGCTGCGCGGCGCGGGCTATGCCAGCGCGCAGGTGCATTGGGATGCGGAAAACGCCAAGCTGGTGATTGAAGCCTCTCTTGCCGCCACGCAACGGCACGATCTGGAGCGCTTGCTCGCCAGCGCCGACTCGCCCGTGCGCGGCTTCCCGCTGGCGCTGCAAGTGGCCGAGCAGGCGCAGGAGGCCGCGTCCAGCATGCATGTGAGCGAAGCCCCGCTGCCGTTTCGCATACGCAGCGTGGTGAGCGGCCCCGCACCCTTCGTGGTGCTTGAGGACGGCAGCAAACTGCTGCAAGGCGCGCAGAAAGGCGACTGGCGCCTGGAGCAGATCAACCCCGACACCCTCGTTTTTGACGGGCCTGAGCGCCTGGTTCTGACCCGATGA
PROTEIN sequence
Length: 490
MSARPQPDPQAANDADSAAELRILSGCHAGARAPATEALRLGAGDDCDIILNDIDLPEGASIRLQVSREHWSARQDPMAAAHEADEPIAHQAWGEPATVGGITLTVCAPRSAWPALARALPETSANDARPPLLPQLAPLPATAADASTVTAPALTGDAEAAPDDNPAPEPAASRPSASRIALLLGSILVVFLLAAVLALWLWQDRSRPLPETTPVADTRPVDAAAQQLWLRNARQALAGVDPALRLDMAPLPDGRIRVAGWVSDIKQLDQVVEALGRLQPAPVLALRTTADLFDELSSVANAQGAVIHLELAGAGRIRVTGALQAEQEHTQVLEKLRERIPAGVDLVDGLRVAETAAPSVQQWLRGAGYASAQVHWDAENAKLVIEASLAATQRHDLERLLASADSPVRGFPLALQVAEQAQEAASSMHVSEAPLPFRIRSVVSGPAPFVVLEDGSKLLQGAQKGDWRLEQINPDTLVFDGPERLVLTR*