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cn_combo_scaffold_387

Alias: CYT12_2

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_387_1
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..522
-----------------
DNA (522bp)
protein (174aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y9T5_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ31118.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginib
antimicrobial peptide ABC transporter permease
cn_combo_scaffold_387_2
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

697..3108
-----------------
DNA (2412bp)
protein (804aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000360881D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI48367.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformi
cn_combo_scaffold_387_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3144..5537
-----------------
DNA (2394bp)
protein (798aa)
Uncharacterized protein n=2 Tax=Niabella soli DSM 19437 RepID=H1NPC9_9SPHI
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF17435.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
cn_combo_scaffold_387_4
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5542..7941
-----------------
DNA (2400bp)
protein (800aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037210B7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92784.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
cn_combo_scaffold_387_5
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8083..8709
-----------------
DNA (627bp)
protein (209aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000368B41B
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACT95907.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter ferment
cn_combo_scaffold_387_6
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8781..9875
-----------------
DNA (1095bp)
protein (365aa)
Anti-FecI sigma factor, FecR n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VXJ7_DYAFD
FecR anti-FecI sigma factor
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ACT93340.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strai
cn_combo_scaffold_387_7
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10007..13393
-----------------
DNA (3387bp)
protein (1129aa)
TonB-dependent receptor n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZWS3_9BACT
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:KKB52037.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" so
TonB-dependent receptor plug
cn_combo_scaffold_387_8
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13629..15140
-----------------
DNA (1512bp)
protein (504aa)
SusD/RagB family protein containing tetratricope ptide repeat n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZWM0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKB54994.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordon
SusD/RagB family lipoprotein
cn_combo_scaffold_387_9
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15188..16723
-----------------
DNA (1536bp)
protein (512aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000370860E
Uncharacterized protein {ECO:0000313|EMBL:KKB57912.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordon
sulfatase
cn_combo_scaffold_387_10
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16895..19366
-----------------
DNA (2472bp)
protein (824aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EGC4_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI48763.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformi
cn_combo_scaffold_387_11
Nitritalea halalkaliphila, Nitritalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19597..20760
-----------------
DNA (1164bp)
protein (388aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Nitritalea halalkaliphila LW7 RepID=I5C9B9_9BACT
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:EIM78421.1}; TaxID=1189621 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Nitritalea.;" source="Nitritalea h
hypothetical protein
cn_combo_scaffold_387_12
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21229..23391
-----------------
DNA (2163bp)
protein (721aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CE33_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ77794.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
cn_combo_scaffold_387_13
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23462..23917)
-----------------
DNA (456bp)
protein (152aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003701F35
Uncharacterized protein {ECO:0000313|EMBL:ETZ22717.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V4
hypothetical protein
cn_combo_scaffold_387_14
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24120..27446
-----------------
DNA (3327bp)
protein (1109aa)
cytochrome C-containing protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000374C282
Uncharacterized protein {ECO:0000313|EMBL:ACT93426.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
hypothetical protein
cn_combo_scaffold_387_15
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27456..28928
-----------------
DNA (1473bp)
protein (491aa)
sulfatase n=1 Tax=Dyadobacter beijingensis RepID=UPI0003696A55
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93425.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
cn_combo_scaffold_387_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29133..29798
-----------------
DNA (666bp)
protein (222aa)
Phosphonate-transporting ATPase n=1 Tax=Niabella soli DSM 19437 RepID=H1NPE2_9SPHI
phosphonate ABC transporter ATP-binding protein
Phosphonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHF15033.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source
cn_combo_scaffold_387_17
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(29807..30121)
-----------------
DNA (315bp)
protein (105aa)
Transcriptional regulator, XRE family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VTL7_DYAFD
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACT92960.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermenta
cn_combo_scaffold_387_18
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

30240..30947
-----------------
DNA (708bp)
protein (236aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VSF0_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96385.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
cn_combo_scaffold_387_19
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30935..32305)
-----------------
DNA (1371bp)
protein (457aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GTD8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH57167.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
cn_combo_scaffold_387_20
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32286..32804)
-----------------
DNA (519bp)
protein (173aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W010_DYAFD
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACT95337.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacte
cn_combo_scaffold_387_21
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32936..33721)
-----------------
DNA (786bp)
protein (262aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037BA944
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94768.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
cn_combo_scaffold_387_22
unknown

Not on your lists

34046..34264
-----------------
DNA (219bp)
protein (73aa)

This feature has no annotations

cn_combo_scaffold_387_23
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(34434..35216)
-----------------
DNA (783bp)
protein (261aa)
Uncharacterized protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NP29_9BACT
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:AHM59627.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source=
Endonuclease/exonuclease/phosphatase
cn_combo_scaffold_387_24
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35380..36375)
-----------------
DNA (996bp)
protein (332aa)
Metallophosphoesterase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GRI7_9SPHI
Metallophosphoesterase {ECO:0000313|EMBL:EOR94308.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter
metallophosphoesterase
cn_combo_scaffold_387_25
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36495..37598)
-----------------
DNA (1104bp)
protein (368aa)
Putative uncharacterized protein id=4324631 bin=GWA2_Bacteroidetes_42_15 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
cn_combo_scaffold_387_26
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37603..38595)
-----------------
DNA (993bp)
protein (331aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000372D152
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
cn_combo_scaffold_387_27
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38793..40523)
-----------------
DNA (1731bp)
protein (577aa)
RagB/SusD domain-containing protein Tax=GWE2_Bacteroidetes_42_39_curated
RagB/SusD domain-containing protein id=2700419 bin=GWF2_Bacteroidetes_42_66 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
RagB/SusD domain-containing protein
cn_combo_scaffold_387_28
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40573..43518)
-----------------
DNA (2946bp)
protein (982aa)
TonB-dependent Receptor id=1882893 bin=GWE2_Bacteroidetes_42_39 species=Zobellia galactanivorans genus=Zobellia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
TonB-dependent Receptor Tax=GWE2_Bacteroidetes_42_39_curated
TonB-dependent receptor plug
cn_combo_scaffold_387_29
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43618..45411)
-----------------
DNA (1794bp)
protein (598aa)
RagB/SusD domain protein id=1882895 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=unknown taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
RagB/SusD domain-containing protein Tax=GWE2_Bacteroidetes_42_39_curated
RagB/SusD domain-containing protein
cn_combo_scaffold_387_30
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45469..48948)
-----------------
DNA (3480bp)
protein (1160aa)
TonB-dependent receptor plug domain protein id=4959474 bin=GWA2_Bacteroidetes_42_15 species=Echinicola vietnamensis genus=Echinicola taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
SusC/RagA family TonB-linked outer membrane protein Tax=GWE2_Bacteroidetes_42_39_curated
SusC/RagA family TonB-linked outer membrane protein
Displaying items 1-30 of 58 in total

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