Alias: CYT12_4
| name | lists | location/seqs | annotations | notes |
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cn_combo_scaffold_795_1
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
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Not on your lists |
comp(1..546)
----------------- DNA (546bp) protein (182aa) |
Tyrosine recombinase XerC n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VXU9_DYAFD
integrase family protein
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (stra
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cn_combo_scaffold_795_2
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
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Not on your lists |
comp(609..2738)
----------------- DNA (2130bp) protein (710aa) |
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase {ECO:0000313|EMBL:AEI47602.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEI47602.1};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagale
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EC71_RUNSL
rhamnulose-1-phosphate aldolase/alcohol dehydrogenase
rbh
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cn_combo_scaffold_795_3
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
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Not on your lists |
3187..3660
----------------- DNA (474bp) protein (158aa) |
Ferric uptake regulator, Fur family n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J1F0_CYCMS
Fur family ferric uptake regulator
Ferric uptake regulation protein FUR {ECO:0000313|EMBL:EON79091.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" sourc
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cn_combo_scaffold_795_4
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
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Not on your lists |
comp(3854..4366)
----------------- DNA (513bp) protein (171aa) |
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003740E0E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96092.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
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cn_combo_scaffold_795_5
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
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Not on your lists |
comp(4434..6839)
----------------- DNA (2406bp) protein (802aa) |
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytop
Ribonuclease R n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VV97_DYAFD
ribonuclease R
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cn_combo_scaffold_795_6
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
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Not on your lists |
comp(6879..7622)
----------------- DNA (744bp) protein (248aa) |
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VV96_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94919.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
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cn_combo_scaffold_795_7
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
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Not on your lists |
comp(7647..8381)
----------------- DNA (735bp) protein (245aa) |
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000
Octanoyltransferase n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BYS7_9BACT
lipoate-protein ligase B
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cn_combo_scaffold_795_8
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
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Not on your lists |
8501..8857
----------------- DNA (357bp) protein (119aa) |
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037CC478
UPF0102 protein BN8_06241 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
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cn_combo_scaffold_795_9
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
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Not on your lists |
comp(8873..9358)
----------------- DNA (486bp) protein (162aa) |
GAF domain-containing protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EBE3_RUNSL
GAF domain-containing protein
GAF domain-containing protein {ECO:0000313|EMBL:AEI47526.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATC
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cn_combo_scaffold_795_10
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
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Not on your lists |
9446..10279
----------------- DNA (834bp) protein (278aa) |
Formyltetrahydrofolate deformylase {ECO:0000313|EMBL:AEI48128.1}; EC=3.5.1.10 {ECO:0000313|EMBL:AEI48128.1};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Ru
Formyltetrahydrofolate deformylase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ECS0_RUNSL
formyltetrahydrofolate deformylase
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cn_combo_scaffold_795_11
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
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Not on your lists |
comp(10315..11106)
----------------- DNA (792bp) protein (264aa) |
Transcriptional regulator n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FUJ7_ECHVK
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGA76698.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (stra
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cn_combo_scaffold_795_12
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
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Not on your lists |
11336..12559
----------------- DNA (1224bp) protein (408aa) |
Major facilitator superfamily MFS_1 n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QLS4_SPILD
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADB40364.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spiro
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cn_combo_scaffold_795_13
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
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Not on your lists |
12667..14166
----------------- DNA (1500bp) protein (500aa) |
L-arabinose isomerase {ECO:0000256|SAAS:SAAS00093763}; EC=5.3.1.4 {ECO:0000256|SAAS:SAAS00093763};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;"
arabinose isomerase n=1 Tax=Dyadobacter beijingensis RepID=UPI0003662F4F
L-fucose isomerase-like protein
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cn_combo_scaffold_795_14
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
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Not on your lists |
14225..17410
----------------- DNA (3186bp) protein (1062aa) |
TonB-dependent receptor n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7WLS3_9BACT
TonB-dependent receptor {ECO:0000313|EMBL:EPR65163.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-
SusC/RagA family TonB-linked outer membrane protein
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cn_combo_scaffold_795_15
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
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Not on your lists |
17473..18867
----------------- DNA (1395bp) protein (465aa) |
Putative nutrient binding outer membrane protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7V6E9_9BACT
Putative nutrient binding outer membrane protein {ECO:0000313|EMBL:EPR65162.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cy
RagB/SusD domain-containing protein
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cn_combo_scaffold_795_16
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
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Not on your lists |
18950..22219
----------------- DNA (3270bp) protein (1090aa) |
Putative outer membrane protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EB80_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ETZ23912.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V4
SusC/RagA family TonB-linked outer membrane protein
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cn_combo_scaffold_795_17
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
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Not on your lists |
22277..23887
----------------- DNA (1611bp) protein (537aa) |
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EB79_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ETZ23913.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V4
lipoprotein
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| cn_combo_scaffold_795_18 |
Not on your lists |
23917..24954
----------------- DNA (1038bp) protein (346aa) |
Beta-ureidopropionase (EC:3.5.1.6)
Putative nitrilase n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7WMU9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKN83421.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
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cn_combo_scaffold_795_19
RLO_PLX_64_10, Bacteria
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Not on your lists |
25112..27196
----------------- DNA (2085bp) protein (695aa) |
Putative uncharacterized protein n=1 Tax=Prevotella maculosa OT 289 RepID=H1HJZ7_9BACT
heparinase II/III family protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
heparinase II/III family protein
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cn_combo_scaffold_795_20
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
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Not on your lists |
27293..29818
----------------- DNA (2526bp) protein (842aa) |
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QLS0_SPILD
Uncharacterized protein {ECO:0000313|EMBL:ADB40360.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingual
hypothetical protein
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cn_combo_scaffold_795_21
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria
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Not on your lists |
30276..31019
----------------- DNA (744bp) protein (248aa) |
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WW38_9PORP
polysaccharide deacetylase
Uncharacterized protein {ECO:0000313|EMBL:EGK06653.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22
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cn_combo_scaffold_795_22
unknown
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Not on your lists |
31035..31247
----------------- DNA (213bp) protein (71aa) |
This feature has no annotations |
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cn_combo_scaffold_795_23
Aureobasidium namibiae, Aureobasidium, Dothideales, Dothideomycetidae, Ascomycota, Fungi
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Not on your lists |
31244..31993
----------------- DNA (750bp) protein (250aa) |
Glycoside hydrolase family 16 protein {ECO:0000313|EMBL:KEQ77890.1}; TaxID=1043004 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Dothideomycetidae; Dothideales; Aure
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cn_combo_scaffold_795_24
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria
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Not on your lists |
32013..36782
----------------- DNA (4770bp) protein (1590aa) |
Glycoside hydrolase family 2 sugar binding protein id=3960923 bin=GWF2_Bacteroidetes_41_9 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
glycoside hydrolase Tax=GWA2_Bacteroidetes_40_15_curated
glycoside hydrolase
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cn_combo_scaffold_795_25
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
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Not on your lists |
36888..37808
----------------- DNA (921bp) protein (307aa) |
GlcNAc-PI de-N-acetylase n=1 Tax=Dyadobacter beijingensis RepID=UPI0003665EF2
LmbE family protein
LmbE family protein {ECO:0000313|EMBL:ACT92401.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter ferment
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cn_combo_scaffold_795_26
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
38128..38835
----------------- DNA (708bp) protein (236aa) |
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2RZX1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ERK88801.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
hypothetical protein
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cn_combo_scaffold_795_27
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
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Not on your lists |
39023..42499
----------------- DNA (3477bp) protein (1159aa) |
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003756070
putative phytochrome sensor protein
Putative phytochrome sensor protein {ECO:0000313|EMBL:ACT92748.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans
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cn_combo_scaffold_795_28
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
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Not on your lists |
42585..43217
----------------- DNA (633bp) protein (211aa) |
Putative transcriptional regulatory protein NarL n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NLZ4_9BACT
Putative transcriptional regulatory protein NarL {ECO:0000313|EMBL:EMR02775.1}; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesi
Transcriptional regulatory protein liaR
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cn_combo_scaffold_795_29
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
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Not on your lists |
43512..47318
----------------- DNA (3807bp) protein (1269aa) |
Membrane-bound dehydrogenase domain protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EC83_RUNSL
membrane-bound dehydrogenase domain-containing protein
Membrane-bound dehydrogenase domain protein {ECO:0000313|EMBL:AEI47614.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source=
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cn_combo_scaffold_795_30
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
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Not on your lists |
comp(47403..49622)
----------------- DNA (2220bp) protein (740aa) |
Isocitrate dehydrogenase, NADP-dependent {ECO:0000313|EMBL:EFK56759.1}; EC=1.1.1.42 {ECO:0000313|EMBL:EFK56759.1};; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales;
isocitrate dehydrogenase (EC:1.1.1.42)
Isocitrate dehydrogenase, NADP-dependent n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VSK8_9SPHI
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