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cn_combo_scaffold_1342

Alias: CYT12_15

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1342_1
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3..728
-----------------
DNA (726bp)
protein (242aa)
peptidase n=1 Tax=Dyadobacter beijingensis RepID=UPI0003642CA5
20S proteasome subunits A/B
20S proteasome A and B subunits {ECO:0000313|EMBL:AEI51341.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain A
cn_combo_scaffold_1342_2
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

770..2173
-----------------
DNA (1404bp)
protein (468aa)
Phosphomannomutase {ECO:0000313|EMBL:ACT95617.1}; EC=5.4.2.8 {ECO:0000313|EMBL:ACT95617.1};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" sour
Phosphomannomutase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W242_DYAFD
phosphomannomutase
cn_combo_scaffold_1342_3
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2180..3322
-----------------
DNA (1143bp)
protein (381aa)
Aminotransferase class V n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W243_DYAFD
class V aminotransferase
Aminotransferase class V {ECO:0000313|EMBL:ACT95618.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain AT
cn_combo_scaffold_1342_4
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3414..6233
-----------------
DNA (2820bp)
protein (940aa)
TonB-dependent receptor n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZS99_9BACT
TonB-dependent receptor {ECO:0000313|EMBL:EON76879.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacte
hypothetical protein
cn_combo_scaffold_1342_5
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6411..7778
-----------------
DNA (1368bp)
protein (456aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZS54_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EON76878.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacte
hypothetical protein
cn_combo_scaffold_1342_6
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7918..8496
-----------------
DNA (579bp)
protein (193aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00036B7B8D
Uncharacterized protein {ECO:0000313|EMBL:KGO87311.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium riv
cn_combo_scaffold_1342_7
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8521..9567
-----------------
DNA (1047bp)
protein (349aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GT20_9BACT
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:CCH57049.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi B
xylose isomerase domain-containing protein
cn_combo_scaffold_1342_8
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9637..11913)
-----------------
DNA (2277bp)
protein (759aa)
PKD domain containing protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QKN7_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD53971.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
cn_combo_scaffold_1342_9
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12108..12638)
-----------------
DNA (531bp)
protein (177aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EF60_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI48937.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformi
cn_combo_scaffold_1342_10
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12625..13437)
-----------------
DNA (813bp)
protein (271aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QKN9_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD58288.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
cn_combo_scaffold_1342_11
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13462..14817)
-----------------
DNA (1356bp)
protein (452aa)
carbohydrate-binding protein SusD n=1 Tax=Spirosoma luteum RepID=UPI0003818CEA
RagB/SusD domain-containing protein
RagB/SusD domain protein {ECO:0000313|EMBL:ADB40206.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 339
cn_combo_scaffold_1342_12
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14861..17899)
-----------------
DNA (3039bp)
protein (1013aa)
TonB-dependent receptor plug n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EF57_RUNSL
TonB-dependent receptor plug {ECO:0000313|EMBL:AEI48934.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithy
TonB-dependent receptor plug rbh
cn_combo_scaffold_1342_13
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18126..18878
-----------------
DNA (753bp)
protein (251aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EBZ4_9SPHI
type 12 methyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EDM37243.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BA
cn_combo_scaffold_1342_14
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18940..19719)
-----------------
DNA (780bp)
protein (260aa)
glycosyl transferase family 2 n=1 Tax=Dyadobacter beijingensis RepID=UPI00037F210C
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACT95986.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (stra
cn_combo_scaffold_1342_15
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19701..20987)
-----------------
DNA (1287bp)
protein (429aa)
Glycosyl transferase group 1 n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K4U2_9BACT
glycosyl transferase group 1 rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:CCG99145.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
cn_combo_scaffold_1342_16
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21074..21682)
-----------------
DNA (609bp)
protein (203aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W7K9_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96203.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
cn_combo_scaffold_1342_17
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21837..22067
-----------------
DNA (231bp)
protein (77aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QRR5_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41497.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 3390
cn_combo_scaffold_1342_18
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22307..22765
-----------------
DNA (459bp)
protein (153aa)
ATPase n=1 Tax=Rudanella lutea RepID=UPI0003731C9E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH55510.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
cn_combo_scaffold_1342_19
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22772..24004
-----------------
DNA (1233bp)
protein (411aa)
Alanine dehydrogenase {ECO:0000313|EMBL:ACT96162.1}; EC=1.4.1.1 {ECO:0000313|EMBL:ACT96162.1};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" s
Alanine dehydrogenase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6V1_DYAFD
Alanine dehydrogenase
cn_combo_scaffold_1342_20
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24201..24605
-----------------
DNA (405bp)
protein (135aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000368971A
Uncharacterized protein {ECO:0000313|EMBL:CCH55512.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
cn_combo_scaffold_1342_21
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24629..26281
-----------------
DNA (1653bp)
protein (551aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037C1F8A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH54662.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
cn_combo_scaffold_1342_22
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26325..27080
-----------------
DNA (756bp)
protein (252aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Bacteriovorax sp. DB6_IX RepID=T0RME1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KJS06968.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
family 2 glycosyl transferase
cn_combo_scaffold_1342_23
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27240..29195
-----------------
DNA (1956bp)
protein (652aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=471854 species="Bacteria; Ba
DNA gyrase subunit B n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6X5_DYAFD
DNA gyrase subunit B
cn_combo_scaffold_1342_24
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29322..30242
-----------------
DNA (921bp)
protein (307aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GQB1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH56089.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
cn_combo_scaffold_1342_25
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

30331..32601
-----------------
DNA (2271bp)
protein (757aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
polyphosphate kinase n=1 Tax=Dyadobacter beijingensis RepID=UPI000374458C
polyphosphate kinase
cn_combo_scaffold_1342_26
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

32620..33861
-----------------
DNA (1242bp)
protein (414aa)
Na+ dependent nucleoside transporter domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W4B6_DYAFD
Na+ dependent nucleoside transporter domain-containing protein
Nucleoside permease {ECO:0000256|RuleBase:RU362018}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter ferme
cn_combo_scaffold_1342_27
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33866..35842)
-----------------
DNA (1977bp)
protein (659aa)
RagB/SusD domain-containing protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NP14_9SPHI
Membrane protein {ECO:0000313|EMBL:AHF15134.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
membrane protein rbh
cn_combo_scaffold_1342_28
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35876..38155)
-----------------
DNA (2280bp)
protein (760aa)
TonB-dependent receptor plug n=1 Tax=Niabella soli DSM 19437 RepID=H1NP13_9SPHI
TonB-linked outer membrane protein {ECO:0000313|EMBL:AHF15135.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella so
TonB-linked outer membrane protein rbh
Displaying 28 items

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