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cn_combo_scaffold_2481

Alias: CYT12_53

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2481_1
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2..1642
-----------------
DNA (1641bp)
protein (547aa)
organic solvent tolerance protein OstA n=1 Tax=Dyadobacter beijingensis RepID=UPI0003607925
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94839.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
cn_combo_scaffold_2481_2
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1805..2719
-----------------
DNA (915bp)
protein (305aa)
epimerase n=1 Tax=Dyadobacter beijingensis RepID=UPI00036241A8
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ACT94170.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans
cn_combo_scaffold_2481_3
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2863..4200
-----------------
DNA (1338bp)
protein (446aa)
TPR repeat-containing protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W5F1_DYAFD
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:ACT94169.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (stra
cn_combo_scaffold_2481_4
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4217..4852)
-----------------
DNA (636bp)
protein (212aa)
Uridine kinase {ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|RuleBase:RU003825};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" sou
Uridine kinase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3P9_DYAFD
phosphoribulokinase/uridine kinase
cn_combo_scaffold_2481_5
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4858..8124)
-----------------
DNA (3267bp)
protein (1089aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000370BDB5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92582.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
cn_combo_scaffold_2481_6
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8189..9151
-----------------
DNA (963bp)
protein (321aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036C821F
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:ACT94847.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermenta
cn_combo_scaffold_2481_7
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9179..10219)
-----------------
DNA (1041bp)
protein (347aa)
glyoxalase n=1 Tax=Dyadobacter beijingensis RepID=UPI000378BD75
Glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ACT94846.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadob
cn_combo_scaffold_2481_8
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10467..13217
-----------------
DNA (2751bp)
protein (917aa)
Peptidase M16 domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W5K5_DYAFD
Peptidase M16 domain protein {ECO:0000313|EMBL:ACT94223.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strai
peptidase M16 domain-containing protein
cn_combo_scaffold_2481_9
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(13303..13560)
-----------------
DNA (258bp)
protein (86aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000345B523
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI49622.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 2953
cn_combo_scaffold_2481_10
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13557..14219)
-----------------
DNA (663bp)
protein (221aa)
Putative thiamine-phosphate diphosphorylase n=1 Tax=Algoriphagus machipongonensis RepID=A3HUE5_9BACT
Putative thiamine-phosphate diphosphorylase {ECO:0000313|EMBL:EAZ81767.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoripha
thiamine monophosphate synthase
cn_combo_scaffold_2481_11
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14235..15290)
-----------------
DNA (1056bp)
protein (352aa)
Hydrogenase maturation factor n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R4D4_OWEHD
hydrogenase maturation factor
Hydrogenase maturation factor {ECO:0000313|EMBL:AEV34234.1}; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkon
cn_combo_scaffold_2481_12
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15347..16063)
-----------------
DNA (717bp)
protein (239aa)
methyltransferase type 11 n=1 Tax=Nafulsella turpanensis RepID=UPI000345E854
SAM-dependent methyltransferase {ECO:0000313|EMBL:EAZ81765.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipon
type 11 methyltransferase
cn_combo_scaffold_2481_13
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16276..17172)
-----------------
DNA (897bp)
protein (299aa)
Fatty acid hydroxylase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GIP8_9BACT
C-5 sterol desaturase
Fatty acid hydroxylase {ECO:0000313|EMBL:CCH53773.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
cn_combo_scaffold_2481_14
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17285..18358
-----------------
DNA (1074bp)
protein (358aa)
Agmatine deiminase {ECO:0000313|EMBL:ACT93847.1}; EC=3.5.3.12 {ECO:0000313|EMBL:ACT93847.1};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" sou
Agmatine deiminase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W2J3_DYAFD
Agmatine deiminase rbh
cn_combo_scaffold_2481_15
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18477..19436
-----------------
DNA (960bp)
protein (320aa)
Alcohol dehydrogenase {ECO:0000313|EMBL:CCH53608.1}; EC=1.1.1.1 {ECO:0000313|EMBL:CCH53608.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" so
Alcohol dehydrogenase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GI83_9BACT
alcohol dehydrogenase
cn_combo_scaffold_2481_16
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19458..22235)
-----------------
DNA (2778bp)
protein (926aa)
Peptidase M14 carboxypeptidase A n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QIQ4_SPILD
peptidase M14 carboxypeptidase A
Peptidase M14 carboxypeptidase A {ECO:0000313|EMBL:ADB39980.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosom
cn_combo_scaffold_2481_17
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22428..22748
-----------------
DNA (321bp)
protein (107aa)
thioredoxin n=1 Tax=Dyadobacter beijingensis RepID=UPI00037B8178
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 /
cn_combo_scaffold_2481_18
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22823..23512)
-----------------
DNA (690bp)
protein (230aa)
ABC transporter related n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W7Q2_DYAFD
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACT96246.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
cn_combo_scaffold_2481_19
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23630..24286)
-----------------
DNA (657bp)
protein (219aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadoba
Probable transaldolase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W7Q1_DYAFD
putative translaldolase
cn_combo_scaffold_2481_20
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24555..25274
-----------------
DNA (720bp)
protein (240aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003775AD0
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ACT96244.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="
cn_combo_scaffold_2481_21
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25694..26158)
-----------------
DNA (465bp)
protein (155aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RS70_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ16722.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterel
cn_combo_scaffold_2481_22
unknown

Not on your lists

comp(26343..26693)
-----------------
DNA (351bp)
protein (117aa)

This feature has no annotations

cn_combo_scaffold_2481_23
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27032..27385
-----------------
DNA (354bp)
protein (118aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037E128C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH00944.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
cn_combo_scaffold_2481_24
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(27395..27991)
-----------------
DNA (597bp)
protein (199aa)
Biotin-protein ligase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JZJ3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIF30915.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
cn_combo_scaffold_2481_25
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

28227..28616
-----------------
DNA (390bp)
protein (130aa)
Ribosomal silencing factor RsfS n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W7P7_DYAFD
iojap family protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans
cn_combo_scaffold_2481_26
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

28681..30738
-----------------
DNA (2058bp)
protein (686aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyto
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W7P6_DYAFD
ATP-dependent metalloprotease FtsH
cn_combo_scaffold_2481_27
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

30884..31717
-----------------
DNA (834bp)
protein (278aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000371A3E3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96939.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
cn_combo_scaffold_2481_28
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

31938..32285
-----------------
DNA (348bp)
protein (116aa)
2-oxoglutarate dehydrogenase, E1 subunit {ECO:0000313|EMBL:ACT96940.1}; EC=1.2.4.2 {ECO:0000313|EMBL:ACT96940.1};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagacea
2-oxoglutarate dehydrogenase, E1 subunit n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VY39_DYAFD
sucA; 2-oxoglutarate dehydrogenase E1 component
Displaying 28 items

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