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cn_combo_scaffold_242_53

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(48615..49157)

Top 3 Functional Annotations

Value Algorithm Source
isochorismatase n=1 Tax=Agromyces italicus RepID=UPI0003B44264 similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 180.0
  • Bit_score: 235
  • Evalue 3.20e-59
Nicotinamidase-like amidase {ECO:0000313|EMBL:EJM72549.1}; TaxID=1144331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas s similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 177.0
  • Bit_score: 196
  • Evalue 3.10e-47
isochorismatase hydrolase similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 177.0
  • Bit_score: 188
  • Evalue 1.70e-45

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Taxonomy

Pseudomonas sp. GM49 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGGTCGCCACACTCGTCATCGTCGACATCCAGAACGACTACTTCCCCGGTTACGCCTTCCCCCTCGTCGGGGCGGACGACGCCGCCGCACGCGCGGGCGAGCTCCTCGCCGGGTGGCGCGATCGCGGTGCTCCGGTCGTGCACGTCCGGCACGTGTGGGAAGGACCGGATGCCGCCTTCATGCGGCCCGACACCGCCGGCTCCGAGATCCATCCGCTCGTCGCCCCGCGCGGCGAGGAGACCGTCATCATCAAGGAGCATCCGAACGCCTTCCGCGACACCCCGCTCGACGGCATCCTGACGCAGCTCGACACCCGCGAGCTCGTCGTCTGCGGCATGATGTCCAGCCTCTGCGTCGATGCGACCGTCCGCGCCGCCGCCGACCTCGGGTACGTCGTCACCGTCGCGCACGACGCGTGCGCCGCACCTGATCTCACGTTCGACGGGGTGACGGTGCCGGGTCGTCAGGTGCACGCGGCGTTCATGGCCGCTCTCGCCGACAGCTACGCCACGATGACCCCCGTGCGGGAGCTCGTCGCCTAG
PROTEIN sequence
Length: 181
MVATLVIVDIQNDYFPGYAFPLVGADDAAARAGELLAGWRDRGAPVVHVRHVWEGPDAAFMRPDTAGSEIHPLVAPRGEETVIIKEHPNAFRDTPLDGILTQLDTRELVVCGMMSSLCVDATVRAAADLGYVVTVAHDACAAPDLTFDGVTVPGRQVHAAFMAALADSYATMTPVRELVA*