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cn_combo_scaffold_242_54

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(49242..49583)

Top 3 Functional Annotations

Value Algorithm Source
MerR family transcriptional regulator n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W7Z6_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 108.0
  • Bit_score: 131
  • Evalue 4.20e-28
Putative transcriptional regulator {ECO:0000313|EMBL:EXG82219.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DS similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 109.0
  • Bit_score: 132
  • Evalue 4.40e-28
MerR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 108.0
  • Bit_score: 131
  • Evalue 1.20e-28

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Taxonomy

Cryptosporangium arvum → Cryptosporangium → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGATCCACCTCTACACGCGCCTCTACGACGAGGAGTCCCTCACCGACCTCCGTGAGATCGTCGCGCACGACGACGACCCCGTCACCGCCGAGATCGATCGACTGCCGGCGGATGCCGACGAGCAGACCCGCCGGGACCTCGCCGAGCGCCTGGCGCCGAGCCTCGCCCAGAACCTCCGCGACTACCCCTGGCTGCTCGATCCGGGAGACCGCCTCACGCGGGGCGAACAGGCCACGCGCGACACGGTCGTCGACGCGATGCGCGAGGTGTACAACCCCGCGCAGCTCGAAGTGCTGGCGCGCGCGAGCATCCTGGCGCACAGACTCGCCGCAGAGGACTGA
PROTEIN sequence
Length: 114
MIHLYTRLYDEESLTDLREIVAHDDDPVTAEIDRLPADADEQTRRDLAERLAPSLAQNLRDYPWLLDPGDRLTRGEQATRDTVVDAMREVYNPAQLEVLARASILAHRLAAED*