name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_biofilm_scaffold_58265_31
bacterium YEK0313, Bacteria
|
Not on your lists |
comp(25007..25753)
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oxidoreductase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F42D58
2-keto-3-deoxy-L-fuconate dehydrogenase {ECO:0000313|EMBL:CEJ12791.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
short-chain dehydrogenase/reductase SDR
|
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berkeley_reactor_200306_biofilm_scaffold_58265_32
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25890..27260
|
glutamine synthetase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B62FF7
Glutamine synthetase family protein {ECO:0000313|EMBL:EKV32354.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
glutamine synthetase
|
|
berkeley_reactor_200306_biofilm_scaffold_58265_33
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27886..28356)
|
GCN5-related N-acetyltransferase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ILP1_METNO
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACL62016.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
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berkeley_reactor_200306_biofilm_scaffold_58265_34
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28353..29018)
|
Putative acetyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=F2VS67_RHITR
putative acetyltransferase, GNAT family
Putative acetyltransferase {ECO:0000313|EMBL:ADO32590.1}; Putative acetyltransferase, GNAT family {ECO:0000313|EMBL:AGB72089.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
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berkeley_reactor_200306_biofilm_scaffold_58265_35
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29040..29753)
|
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IL19_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS68712.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
|
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berkeley_reactor_200306_biofilm_scaffold_58265_36
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(29876..30601)
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Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UNR3_METS4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA17168.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
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berkeley_reactor_200306_biofilm_scaffold_58265_37
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30841..32646)
|
dihydroxy-acid dehydratase n=1 Tax=Kaistia granuli RepID=UPI00036485C2
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:EGX99914.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
dihydroxy-acid dehydratase
|
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berkeley_reactor_200306_biofilm_scaffold_58265_38
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32824..34008
|
aspartate aminotransferase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000312BA75
Methylobacterium aquaticum plasmid pMaq22A_1p DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ48478.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
class I and II aminotransferase
|
|
berkeley_reactor_200306_biofilm_scaffold_58265_39
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34104..34628
|
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IMI6_AZOC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF86557.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
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berkeley_reactor_200306_biofilm_scaffold_58265_40
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34646..35566
|
ribokinase n=1 Tax=Xanthobacteraceae RepID=UPI000372C6CB
ribokinase-like domain-containing protein
PfkB domain protein {ECO:0000313|EMBL:ABS65657.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
|
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berkeley_reactor_200306_biofilm_scaffold_58265_41
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
35809..38508
|
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BHW7_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK60006.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
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berkeley_reactor_200306_biofilm_scaffold_58265_42
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
38508..39860
|
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003778763
virulence factor family protein
Virulence factor family protein {ECO:0000313|EMBL:ADJ25312.1}; Flags: Precursor;; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
|
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berkeley_reactor_200306_biofilm_scaffold_58265_43
alpha proteobacterium JLT2015, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
39987..40379
|
Uncharacterized protein n=1 Tax=alpha proteobacterium JLT2015 RepID=M2TPQ1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EMD83746.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_58265_44
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria
|
Not on your lists |
comp(40384..41919)
|
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00036EC8CE
xylB; xylulose kinase
Tax=Caldatribacterium californiense
|
|
berkeley_reactor_200306_biofilm_scaffold_58265_45
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(41968..42600)
|
Class II aldolase/adducin-like protein n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RKL7_MOOTA
class II aldolase/adducin-like protein
Class II aldolase/adducin-like protein {ECO:0000313|EMBL:ABC19022.1}; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;"
|
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berkeley_reactor_200306_biofilm_scaffold_58265_46
Streptomyces sp. NRRL S-444, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(42625..43575)
|
RpiR family transcriptional regulator n=1 Tax=Streptomyces tsukubaensis NRRL18488 RepID=I2N0P7_9ACTO
RpiR family transcriptional regulator {ECO:0000313|EMBL:KJY37760.1}; TaxID=1609134 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-444.;"
transcriptional regulator
|
|
berkeley_reactor_200306_biofilm_scaffold_58265_47
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(43648..44748)
|
ABC transporter n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8A9V2_RHIRD
ABC transporter {ECO:0000313|EMBL:EMS97544.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
ABC transporter
|
|
berkeley_reactor_200306_biofilm_scaffold_58265_48
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(44773..45606)
|
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EKD2_9RHIZ
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCV05219.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
binding-protein-dependent transport systems inner membrane component
|
|
berkeley_reactor_200306_biofilm_scaffold_58265_49
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(45603..46535)
|
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EM02_9RHIZ
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:CDX20187.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
binding-protein-dependent transport systems inner membrane component
|
|
berkeley_reactor_200306_biofilm_scaffold_58265_50
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(46615..47982)
|
Extracellular solute-binding protein family 1 n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ELL7_9RHIZ
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CCV05217.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
family 1 extracellular solute-binding protein
|
|
berkeley_reactor_200306_biofilm_scaffold_58265_51
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
48315..48677
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1M7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81574.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|