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berkeley_reactor_200306_biofilm_scaffold_2007_11

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(11895..12176)

Top 3 Functional Annotations

Value Algorithm Source
Translation initiation factor IF-1 n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPG5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 93.0
  • Bit_score: 156
  • Evalue 9.90e-36
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 93.0
  • Bit_score: 156
  • Evalue 1.40e-35
infA; translation initiation factor IF-1 similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 93.0
  • Bit_score: 152
  • Evalue 5.30e-35

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Taxonomy

Microvirga aerilata → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 282
ATGGCCAAAGAAGAACTGATGGAATTCGAAGGCTCGGTTTCCGAAGTCCTGCCGGACGCCCGTTTCCGGGTGAAGCTCGACAACGGTCACGAGATGATCGCCTACACCGCCGGCAAGATGAAGAAGAACCGCATCAAGACCATCGAGGGTGACCGCGTCACCGTCGAGATGAGCCCCTACGACCTCGACAAGGGCCGGATCATCTTCCGCCACAAGGACGAGCGCGCCGCCGCCGGCCCGCGCCCGCCGCAGCGTGGTGGTGGCAACATGCGCCGGCGCTGA
PROTEIN sequence
Length: 94
MAKEELMEFEGSVSEVLPDARFRVKLDNGHEMIAYTAGKMKKNRIKTIEGDRVTVEMSPYDLDKGRIIFRHKDERAAAGPRPPQRGGGNMRRR*