ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_2007_12

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(12217..13461)

Top 3 Functional Annotations

Value Algorithm Source
DEAD/DEAH box helicase domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HW11_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 409.0
  • Bit_score: 484
  • Evalue 9.20e-134
DEAD/DEAH box helicase similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 409.0
  • Bit_score: 484
  • Evalue 2.60e-134
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ABS64094.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 409.0
  • Bit_score: 484
  • Evalue 1.30e-133

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1245
ATGACAGACCAGACTTTCACGGCGCTCGGCTTGGCCGAACCGCTGCTGCGCGCGCTCGACGCCGCCGGCTACCACACGCCCACCCCGATCCAGGCCCGGGCGATCCCGCCGCTGCTGGAAGGCCGCGACATGATGGGCCTGGCCCAGACCGGCACGGGCAAGACCGCCGCCTTCGCGCTGCCGATCCTGCAGCGCCTCAGCGCCATTCCCGCCGGCCCCGGCCCCAAGGGCGTGCGTGCCCTGATCCTCGCCCCGACCCGTGAGCTCGCCGTGCAGATCGACGAGAGCTTCCGGACCTATGGCAAGCATGTGCGCCTCAAGACGGCCGTCGTGTTCGGCGGCGTCGGCCAGGGCAACCAGGTCAAGGCGCTGTCGGACGGCGTCGACATCCTCGTCGCCACGCCCGGCCGCCTGCTCGACCTGCACCAGCAGCGCAAGGTCCGCCTCGACAAGGTGAAGATCCTGGTGCTGGACGAAGCCGACCGCATGCTCGACATGGGCTTTTCGCGAGACGTGCTGAAGATCGTCGACGAGACGCCGCTGGAGCGCCAGTCGCTGCTGTTCTCGGCCACCATGCCCAAGGCGATCAAGAAGCTCGGCGAGGAGATCCTGCTGAGCCCCGTGCATGTGGAGGTGACGCCGGAAGTGGTCACCGTCGACAAGATCGACCAGCACGTCTTCCACGTGCCGACCTCGGTGAAGCGCTCGCTGCTGCTGCACCTGCTGAACGACCCCGCCATGACGCGCGTCATCGTCTTCACCCGCACCAAGCACGGCGCCAACCGCGTCGCCGACCAGCTCGAGCGCGCCGGCGTGGGAGCGGCGGCGATCCACGGCAACAAGTCGCAGAACGCCCGGCAGAAGGCGCTGGAGGATTTCCGCGCCGGCAAGGTGCGCATCCTCGTCGCCACCGACATCGCGGCGCGCGGCATCGACGTGGACGAGATCAGCCATGTCATCAATTACGAATTGCCGGTGGATGCGGAGAGCTACGTGCACCGTATCGGCCGCACGGCTCGCGCCGGTCGCAGCGGTGTCGCCTATTCCTTCTGCGATGCGTCCGAGAAGGGGGAACTGAAGGATATCGAACGGCTCACCAGGAAGCCGCTGCAGGTTGCCGCTCCGGTGCAGGGGCTGGAGGCCGACCAGCATCGCGACCGCGGTCATCGGCCGGCGCATCAGGACCAGCGCCCGCGCGGGGATCGCAATCGCGGCGCCCGTCGGCCCCAGCGCCGTGCGGCCTGA
PROTEIN sequence
Length: 415
MTDQTFTALGLAEPLLRALDAAGYHTPTPIQARAIPPLLEGRDMMGLAQTGTGKTAAFALPILQRLSAIPAGPGPKGVRALILAPTRELAVQIDESFRTYGKHVRLKTAVVFGGVGQGNQVKALSDGVDILVATPGRLLDLHQQRKVRLDKVKILVLDEADRMLDMGFSRDVLKIVDETPLERQSLLFSATMPKAIKKLGEEILLSPVHVEVTPEVVTVDKIDQHVFHVPTSVKRSLLLHLLNDPAMTRVIVFTRTKHGANRVADQLERAGVGAAAIHGNKSQNARQKALEDFRAGKVRILVATDIAARGIDVDEISHVINYELPVDAESYVHRIGRTARAGRSGVAYSFCDASEKGELKDIERLTRKPLQVAAPVQGLEADQHRDRGHRPAHQDQRPRGDRNRGARRPQRRAA*