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berkeley_reactor_200306_biofilm_scaffold_2007_13

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 14028..15215

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: serine--glyoxylate aminotransferase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1170A similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 395.0
  • Bit_score: 555
  • Evalue 4.00e-155
Serine-glyoxylate aminotransferase {ECO:0000313|EMBL:KEC78847.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.6
  • Coverage: 395.0
  • Bit_score: 550
  • Evalue 1.80e-153
sgaA; serine-glyoxylate aminotransferase-related similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 396.0
  • Bit_score: 549
  • Evalue 4.80e-154

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Taxonomy

Sinorhizobium americanum → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
ATGCAGCATCACACCGGCCTCTTCATCCCGGGGCCGACCAACATTCCCGACCCGGTGCGCCGGGCGATGAACCTGCCGATGGAGGACATGCGCGCCCCCGATTTCCCGGAGCTGACGCTGCCGCTGTTCCGCGACCTCAAGCGTGTGTTCAAGACCGAGACCGGCCAGGCCTTCATCTATCCCGCCTCCGGCACCGGCGGCTGGGAAGCGGTGCTGACCAACACGCTCAATCCCGGCGACAAGGTGCTGATCGCCACCTTCGGCCAGTTCTCGCTGCTCTGGGCCGACATGTGCCGGCGCCTCGGCTTCGACACGGTGGTGGTGGACCGGCCCTGGGGCGAGGGCGTGCCGGTGGAGGCGTTCGCGGACATCCTCGCCCGCGACGGGACGCATCGGATCCGGGCCGTGCTCGCCACCCACAACGAGACCGCGACCGGCGTCACCTCCGACATTGCCGGCCTGCGCCGGGCGCTCGACGCGGCCGGCCATCCCGCCCTGCTCTATGTCGACGGCGTCTCGTCGGTCGCCTCGATCGACCTGCGCATGGACGAATGGGGCCTCGACGCCGTCGTCTCCGGCTCGCAGAAGGGCTTCATGCTGCCGACGGGCCTCGCCATCGTCGCGGTCAGCCAGAAGGCGCTGGAGGCGCACCGGTCTTCGAAGTTCCCGCGCTGCTTCTTCTCCTTCGAAGACATGATGCGCACCAACAAGGACGGCTATTTTCCCTACACGCCGGCGACGACGCTGCTGCGCGGCCTCAGGGCCTCGCTCGACCTCCTGTTTGCGGAAGGCCTGGAGAACGTCTTCACCCGCCACCACCATCTCGCCGAGGGCGTGCGCCGGGCGGTGACGGCCTGGGGCCTGACGCTGTGCGCCCGCGAGCCGAAATGGCATTCGGACACGGTCAGCGCCATCGTCGTGCCGGAGGGCGTCGACAGCACCCAGGTGGCCCGCCAAGCCTATCACCGCTACGGCGTGTCCTTCGGCATCGGCCTCAACAAGGTGGCGGGCAGGGTGTTCCGCATCGGCCATCTCGGCGCGCTGAACGAGCCGATGCTGCTGGGCGCGCTCGGTGCCGCCGAGATGGCGCTGGCCGATTGTGGCGCCCGCATCGCGTTCGGCTCGGGCGTCGCGGCGGCGCAGAGCCATTACGCCAGCCGCAGCAACCTGACCGCCGCCGCGGCCTGA
PROTEIN sequence
Length: 396
MQHHTGLFIPGPTNIPDPVRRAMNLPMEDMRAPDFPELTLPLFRDLKRVFKTETGQAFIYPASGTGGWEAVLTNTLNPGDKVLIATFGQFSLLWADMCRRLGFDTVVVDRPWGEGVPVEAFADILARDGTHRIRAVLATHNETATGVTSDIAGLRRALDAAGHPALLYVDGVSSVASIDLRMDEWGLDAVVSGSQKGFMLPTGLAIVAVSQKALEAHRSSKFPRCFFSFEDMMRTNKDGYFPYTPATTLLRGLRASLDLLFAEGLENVFTRHHHLAEGVRRAVTAWGLTLCAREPKWHSDTVSAIVVPEGVDSTQVARQAYHRYGVSFGIGLNKVAGRVFRIGHLGALNEPMLLGALGAAEMALADCGARIAFGSGVAAAQSHYASRSNLTAAAA*