ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_9338_59

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 59255..59980

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IGA5_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 233.0
  • Bit_score: 342
  • Evalue 1.90e-91
two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 71.7
  • Coverage: 233.0
  • Bit_score: 342
  • Evalue 5.40e-92
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABS67048.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 233.0
  • Bit_score: 342
  • Evalue 2.70e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Xanthobacter autotrophicus → Xanthobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
GTGAACGTCCTTGTGGTCGAAGACGATGCCGATATCGGCTCGATGCTCCGCCGAGGGCTCGGTGCGGAAGGGTTCGACGTCACGGTGGTGGAGCGTGCGGACGATGCGCTCGACACTGCCCGAGCCAACAATCCCTGCGCCGTGCTCCTCGACATGATCCTGCCCGACGGCTCCGGCCTCGACGTCTGCCGCTCGCTGCGCGACGGCGGCCATACCGGCCCGATCCTGTTCCTCAGCGCCAAGGACGAGGTGCGCGACCGGGCCGAGGGCCTCTCCGCCGGCGCCGACGACTATATCGTCAAGCCCTTCCAGTTCGACGAGCTGGTCGCCCGCCTGCGCGCCCATCTCCTGCACCGCTCCGGCCAGGTCGACGAGCGCGAGCGGCTCATCGCCGGACGGTTGATCCTCGACAATGCCACCCGCCAGGCCCTCTACGGCCCGGTGCACGTGCGCCTGACCCAGCGCGAGGCCGAGCTGCTGGCCCTCCTCATGCACAGCGCCAACCGGCCGGTGTCGCGTGGCGACATCTTCGACGCGCTGTGGGCCAATCATGGCGGCGTGTCGCTCAACGTGGTCGACGTCTATGTCGGCTATCTCCGCGGCAAGTTCACCGAGATCACCCGGGCCGGCGGCCCGACCATCGCCACGGTGCGCGGCAAGGGCTTCATGCTCGACCTCGCCGTGACCGCGCCCGTGGAATCCGGCCACGCCGTGCGGCGCTCGTAG
PROTEIN sequence
Length: 242
VNVLVVEDDADIGSMLRRGLGAEGFDVTVVERADDALDTARANNPCAVLLDMILPDGSGLDVCRSLRDGGHTGPILFLSAKDEVRDRAEGLSAGADDYIVKPFQFDELVARLRAHLLHRSGQVDERERLIAGRLILDNATRQALYGPVHVRLTQREAELLALLMHSANRPVSRGDIFDALWANHGGVSLNVVDVYVGYLRGKFTEITRAGGPTIATVRGKGFMLDLAVTAPVESGHAVRRS*