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berkeley_reactor_200306_biofilm_scaffold_7733_5

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(2830..4191)

Top 3 Functional Annotations

Value Algorithm Source
Peptidoglycan-binding domain 1 protein n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7KTK4_METC4 similarity UNIREF
DB: UNIREF100
  • Identity: 37.4
  • Coverage: 454.0
  • Bit_score: 233
  • Evalue 3.10e-58
peptidoglycan-binding protein similarity KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 454.0
  • Bit_score: 233
  • Evalue 8.70e-59
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:ACK82531.1}; TaxID=440085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain CM4 / NCIMB 13688); (Methylobacterium chloromethanicum).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.4
  • Coverage: 454.0
  • Bit_score: 233
  • Evalue 4.30e-58

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Taxonomy

Methylobacterium extorquens → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1362
ATGCGGCGGATGACGACAGCTCTCGGTCTGGCGGTGCTCGTCCTTGCAACCCCGGCGGGGCCGGCCCCGGCGCAGACCAAGCCGCCGGCCGCGGCCGCCAAGCCCGCCGACGCCGCCTTCGATCTCGCCAAGACCGCGGCCGACGCGCTCGGGCCCGAGGCGACCGCCGCCGTCCAGCGCGACCTGATCTGGACCGGCGACCTCAACAGCCTGGCCTCCGGCGAGTTCGGCAAGCGCAGCTTCGACGCCATCCGCGCCTTCCAGAAGCGCATCAAGGCCAAGGACACCGGCATCCTGCTCCCCACCGAGCGCGACCAGCTCGCCAAGGCGGCCGAGCGGGCCGCGGCCGCCTACGGCTTCAAGCCGGTGACGGCGCAGGGCATCACGGTCGGCTATCCCGCCAAGCTGGTGACGCAGAAGACGGCGACCGAGCACGGCGTGAAATATTCGACGCCGACCGGCAACATCACGGTCGACATCCTGCGCTACGCCGCCACGGAGGAAGCCTTCGAGCCGCTGTTCACCCGGCTCAAGACCGAGCGGGCGGGGCGCAAGATCACCTATTCGCTGCTGCGGCCAGACTTCTTCGTCATCGCCGGCACGGTCGACGGCAAGAGCTTCTACATGCGCTTCCTCAAGACCGACGAGGACAGCCGCGGCTTCGTGCTCGGCTGGGATCCGACGCTCTCGCCGGGCTTCGACCGCGTCTCCATCGCCATGGCCGGATCCCTGGCGCTCGCCGGCGCCGCGCCGGCTGCCGGGGTCCCCGCCTCCGGAACGCCCGGTGCCGCGGCCGAGCCGCCGGCGCCGGCCAAGCCCGCCGGCCCGCCGGTGCCGCTGCCCGCCGGAGCGCCTTCCGCGCCGAAGAGCGGCATCGGCTTCCTCGTATCGGCGCGGGGCGACGTACTGACCAGCGCCGCGCTGGTCGCCGGCTGCCGCACGGTGACGGCGGGCGGGGCCAGCGCGCCGGTCGTTGCCGGCGACGCCGCCAACGGTCCGGCCCTGGTGCGCCTCGCCGCCCCGCCCAAGGTTGCGCCGCTGCCGCTGCGCCTGGCGGCGCTCGGCGTCGGCGATGCCGTCGAGCTGGTCGGCCCCGCCGGGCGCAGCGCCACCACCGTCGCCGCCCTGGCCGGGCCGGGCGACGATACCCGCCGCCTGACCCTCGCCGCTCCCGGCGCCGGCGGCGTGTTCGACGCCAAGGGTGCGCTCGCCGGGCTGGTCGCCGGCGATGCCGGACCGGTGGCGCTGAAGGCCCTGTTCGTCTCCGCCTTCCTGCGCGCGAACGGCGTGGCGCTGGCCGCCTCCGAGGGCGGCGACCCCGCCGCCGCCGCAGTGCCGCTGACCTGCACGCCGGGGTCGTGA
PROTEIN sequence
Length: 454
MRRMTTALGLAVLVLATPAGPAPAQTKPPAAAAKPADAAFDLAKTAADALGPEATAAVQRDLIWTGDLNSLASGEFGKRSFDAIRAFQKRIKAKDTGILLPTERDQLAKAAERAAAAYGFKPVTAQGITVGYPAKLVTQKTATEHGVKYSTPTGNITVDILRYAATEEAFEPLFTRLKTERAGRKITYSLLRPDFFVIAGTVDGKSFYMRFLKTDEDSRGFVLGWDPTLSPGFDRVSIAMAGSLALAGAAPAAGVPASGTPGAAAEPPAPAKPAGPPVPLPAGAPSAPKSGIGFLVSARGDVLTSAALVAGCRTVTAGGASAPVVAGDAANGPALVRLAAPPKVAPLPLRLAALGVGDAVELVGPAGRSATTVAALAGPGDDTRRLTLAAPGAGGVFDAKGALAGLVAGDAGPVALKALFVSAFLRANGVALAASEGGDPAAAAVPLTCTPGS*