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berkeley_reactor_200306_biofilm_scaffold_7733_6

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(4390..6612)

Top 3 Functional Annotations

Value Algorithm Source
Helicase, RecD/TraA family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IFR0_METNO similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 738.0
  • Bit_score: 759
  • Evalue 2.00e-216
ATP-dependent RecD-like DNA helicase {ECO:0000313|EMBL:CEJ10699.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 743.0
  • Bit_score: 768
  • Evalue 8.00e-219
recombinase D similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 738.0
  • Bit_score: 759
  • Evalue 5.70e-217

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Taxonomy

bacterium YEK0313 → Bacteria

Sequences

DNA sequence
Length: 2223
ATGACCAGCCCAGATGCCCGGCGCGATTCGCGCGCTTCGCCAGGAGCGCCCGAGCCGGGCGAAGCGCCGGATGCGCGCAGCCTCTCGGGCGTCATCGACCGCGTCACCTACCACAACGAGGAGACCGGCTTTGCCGTGCTCAAGGTCAAGGCCAAGGGCCGCAAGGACCTTGCCACCGTGGTCGGGCGCATCGCCGCCGTCGCGCCCGGCGAGAAGCTGGAGGCGACGGGCCAATGGGTGGTCGACCGCGACCGCGGGCCCCAGTTCAAGGCCGAGACGATCAGCACCGCGGCGCCGGCCTCGGCCAGCGGCATCGAGCGCTATCTCGCCTCCGGCCTGATCCGCGGCATCGGCCAGGAGACGGCCAAGAAGCTGGTCGCCGCCTTCGGCCGGGACACGCTGAAGGTGCTGGATTCGGAGCCCGAGCGGCTCGCCGCCGTGCCCGGCCTCACGCCCGAGCGGGTGCGGCGCATCCGCGAGGGCTGGACGGCGCAGCAGGGCTTTCGCGACGTGCTGCTCTTCCTCACCGAGCACGGGCTCGGCCCGACCCGCGCCGCCAGGGTGCAGAAGACCTTCGGGCCGCAGGCGATCGAGCTGATCCGCGAGGACCCCTATCGCCTCGCCCGCGAGATCAAGGGCTTCGACTTCCAGACCGCCGACCAGTTCGCCCTCAGCCTCGGGCGCGGGCGCGACGATCCGGCGCGGCTGGCGGCCGGGCTCTACGCCGCCCTGCAGGAAGGCGCCATGAACGGCCATTGCGGCGTGCCGCGCATCGCCCTGTTCGAGCGGGCGGCCCGGCTGCTCGGCGTCGACGACGCCGAGCTCGACCAGGCCGCCGGCCGGCTGCTGCAGAGCCGCACCATCATCGCCGACACCATCGGCGGCGAGGCCGCCTTCTTCCTGCCGCCGCTGTGGAAGGCGGAGAATGCCGTCGCCGAGCGGCTGAAGATCCTGGCCGGCGGCCACCCGCCCTGGCGCCAGGACGGCCTCTCCCAGGCGGTGCTGACCGCCGAGGCCCGCACCGGCAAGCGCCTGGCGCCGGCCCAGGCCCTGGCGGTGGAGACGGCGCTCGGCTCCAAATGCCTGGTGATCACCGGCGGGCCCGGCGTCGGCAAGACCACGATCATCGACACCATCCTCAAGGCGCTGGATTCGCGCGAGGTCGAGGTGGCGCTGTGTGCGCCCACCGGCCGCGCCGCCAAGCGCATGGCCGAGAGCACCGGCCGGGAGGCGAAGACCATTCATCGCCTGCTGGAGATCGACCCGGCCACCGGCCAGTTCCGGCGCCAGAGGAGCTATCCCATCGCCGCCGACCTCGTCATCGCCGACGAGGCCAGCATGATCGATGCCGAGCTGATGCAGGCCCTGCTCGACGCCCTGCCCCCGCATGCGGCGCTGATCCTGGTGGGCGACGTCGACCAGCTGCCTTCGGTGGGGCCGGGCCAGGTGCTCGGCGACATCATCGCCTCCGGCGCCGTCTCGGTGGTGCGGCTCACCGAGGTGTTCCGCCAGGCGGGCGAGAGCCGCATCATCGCCGCCGCCCACGCCGTCAACGAGGGCACGGTGCCCGAGGGCGCCAGGAGCCCCGAGGAGGGCGACTTCTTCGTGGTCGAGATGGCCTCGGTCGAGAACGGGGTGCAGAAGATCATCGAGATCGTCACCAGCCGCCTGCCGCGGCGCTTCGGCCTCGACCCCGTGCGGGAGGTGCAGGTGCTGACGCCGATGAACCGTGGCCCGCTCGGCTCCCAGGCCCTGACCCAGGCGCTGCGCGAGGTGCTGAACCCGGCGCGCGAGGGCGCCATCGTGCGCGAGACCGGCGCCTTCGCCCCGCGCGACAAGGTGATGCAGACCGACAACGACTATGAGAAGGAGGTGTTCAACGGCGACATCGGCTATGTCACCGCCACCGACCCGCGCTCCGGCAGCCTGACCGTCGCCTTCGACGGGCGCGAGGTGCACTATGTCGCCGACCAGCTCGACAGCCTGGTGCCGGCCTATGCCACCACCATCCACAAGGCGCAGGGCTCCGAATATCCCGCCGTGGTGGTGGTGCTGGCCAACGCGCATTATCCGATGCTGGCGCGCAATCTGCTCTACACCGCCATCACCCGCGGCAAGCGCCTGGCGGTGCTGGTCACCGAGCGCCGCGCCCTGCGCATGGCGGCCGAGGACGCCATGGGCCGCCGCCGCTGGACCCGGCTGCGCGAGAAGCTGTCGGCATAG
PROTEIN sequence
Length: 741
MTSPDARRDSRASPGAPEPGEAPDARSLSGVIDRVTYHNEETGFAVLKVKAKGRKDLATVVGRIAAVAPGEKLEATGQWVVDRDRGPQFKAETISTAAPASASGIERYLASGLIRGIGQETAKKLVAAFGRDTLKVLDSEPERLAAVPGLTPERVRRIREGWTAQQGFRDVLLFLTEHGLGPTRAARVQKTFGPQAIELIREDPYRLAREIKGFDFQTADQFALSLGRGRDDPARLAAGLYAALQEGAMNGHCGVPRIALFERAARLLGVDDAELDQAAGRLLQSRTIIADTIGGEAAFFLPPLWKAENAVAERLKILAGGHPPWRQDGLSQAVLTAEARTGKRLAPAQALAVETALGSKCLVITGGPGVGKTTIIDTILKALDSREVEVALCAPTGRAAKRMAESTGREAKTIHRLLEIDPATGQFRRQRSYPIAADLVIADEASMIDAELMQALLDALPPHAALILVGDVDQLPSVGPGQVLGDIIASGAVSVVRLTEVFRQAGESRIIAAAHAVNEGTVPEGARSPEEGDFFVVEMASVENGVQKIIEIVTSRLPRRFGLDPVREVQVLTPMNRGPLGSQALTQALREVLNPAREGAIVRETGAFAPRDKVMQTDNDYEKEVFNGDIGYVTATDPRSGSLTVAFDGREVHYVADQLDSLVPAYATTIHKAQGSEYPAVVVVLANAHYPMLARNLLYTAITRGKRLAVLVTERRALRMAAEDAMGRRRWTRLREKLSA*