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berkeley_reactor_200306_biofilm_scaffold_7733_29

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 31185..32087

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF14DC related cluster n=1 Tax=unknown RepID=UPI0003CF14DC similarity UNIREF
DB: UNIREF100
  • Identity: 79.1
  • Coverage: 282.0
  • Bit_score: 447
  • Evalue 6.90e-123
Transcriptional regulator {ECO:0000313|EMBL:ESY32182.1}; TaxID=1287273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC391B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 282.0
  • Bit_score: 447
  • Evalue 9.70e-123
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 281.0
  • Bit_score: 445
  • Evalue 7.40e-123

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Taxonomy

Mesorhizobium sp. LNJC391B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGCGCTACCTCGACAGCGAGACTCTGATGGCCTTCGTCGCCGTCGCCGATACCGGCAGCTTCACCGCGGCCGCCGAGCAGCTCGGCAAGAGCCAGGCGGCGATCAGCATCGCGGTCGGGCGGCTGGAGGAGCGGCTCGAGCTGCGCCTGTTCGACCGCGGCCACCGGCGGGTGACGCCGACGCCGGCCGGCGAGCGCCTGCTCGGCTATGCCCGCCGGATCCGGGCGATCGAGGACGAGGCGCTGGCCATGCTGCTGGAGGGGCGGCGCGAGAGCCGCGTGCGGCTCGGCATGCCGGACGACTACCTCACCCTGTTCGGCACGGCGCTGATGCAGCGCTTCGCGCCGCGCCATCCCATGGTCAATCTCGACCTGCAATACGACTTCTCGCATCGCCTGGAGACGATGGTGGAGAGCCGCGAGCTCGACATCGCCATCATCACCCAGAGCAGCGCCCATCCCCGGGGCGAGGTGATCCGCCTGGAGCGCCAGGTCTGGTGCGCCGCCCCCAATCGCCGGCCGGAAACCGCAAGCTGCCTGCAGCTCGCCTTGTTCCCCGACGGCTGCCGTGCGCGCCCGCAGGTCCTCGCCGCGCTCGATGCGCAGGAGCGGCGCTGGCGCATCGTCTATTCCTCCTCCGACCTCGCCGGCATCCAGCTCGCCGTCGCCTCCGGCGATATCCTGACCGTGCTGCCCGAGGCGGCGGTGCCGCCCGGCTGGCGTCGGCTCGGCCCCGAGCACGGCCTGCCGGAGCTGCCGCTGCTGCGGCTGGCGGTGGTGACGACGCCGCAGGCAAAGCTGGCGGTGCGCCAGCTCGTCGCCTTCCTGCGCAGCGAGTTCCAGAAGGAGGAGGACGGGGAGGACGCCGTCAGCGCCCCGGCTTTGCAGGCCGCAGCGCGGTGA
PROTEIN sequence
Length: 301
MRYLDSETLMAFVAVADTGSFTAAAEQLGKSQAAISIAVGRLEERLELRLFDRGHRRVTPTPAGERLLGYARRIRAIEDEALAMLLEGRRESRVRLGMPDDYLTLFGTALMQRFAPRHPMVNLDLQYDFSHRLETMVESRELDIAIITQSSAHPRGEVIRLERQVWCAAPNRRPETASCLQLALFPDGCRARPQVLAALDAQERRWRIVYSSSDLAGIQLAVASGDILTVLPEAAVPPGWRRLGPEHGLPELPLLRLAVVTTPQAKLAVRQLVAFLRSEFQKEEDGEDAVSAPALQAAAR*