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berkeley_reactor_200306_biofilm_scaffold_7733_30

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(32661..33581)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=2 Tax=Rhizobium meliloti RepID=F6C1W1_SINMB similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 302.0
  • Bit_score: 363
  • Evalue 1.30e-97
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 302.0
  • Bit_score: 363
  • Evalue 3.80e-98
Putative transcriptional regulator, LysR family protein {ECO:0000313|EMBL:CDH82883.1}; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 302.0
  • Bit_score: 363
  • Evalue 1.90e-97

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Taxonomy

Sinorhizobium meliloti → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 921
ATGCTGACGTTGCGCCAGATCGAGGTGGTCCGGGCCGTGATGCTGAGCGGCTCCATCGCCGGCGCGGCGCGCCTGCTCAACGTGGCGCAGCCCGGCGTGAGCCGGACGATGAAGCACATCGAAGCGACCATCGGCATCCGGCTCTTCGCCCGCAGGGGCGGCCGCCATGTGCCGGCCGTCGAAGCGCGCGACGTGTTCGAGCAGCTGCAGGCCGTCAACGAGAAGATCGAGAACCTCAACGCCGCGATCCGCCAGCTGCATGCCGGCGCCGATGTCGAGCTGCGGATCGGGTCGGTGCCGAGCATCGCCAACGTGATGGTGCCGCGCGCCATCGAGAAATTGCGGCGGCGCTTCCCCGGCTTGCGCGTCACCATCGACGTCCTGAAGATCGAGGAGGCGATCGACCATCTCCTGCTCGGGCGCGGCGAGGTGGTGCTGATGAGCCAGCGCTACACCAATGCCTCGATCGTCTTCGACGACCTCGCCCGCGGCCGGCTGGTTTGCATCGTCGCGCCGACCCATCCTCTCGCCGGCATGGCGGTGATTGCGGCGCGCGACCTCGCGCCCTACCCCCTGATCGGCATCGACCCGCGCGATCCCTATGGCCGGATCATGACCGACCTGTTCGAGCGCGACGGGCTGGCCTACACCATCACCATCCGCGCCCGGTTCGGCACCACGGTCTGCGCCCTGGTGAAGCAGAATCTCGGCGTCGCCCTGATCGATGCCTTCACGGTCGCCGACAGCCCCGCCTCCGACCTCGTCGTGATTCCGCTGGCGGAGCCGACCGATTTCCCGACCTTCGTCGCCCACCGCGCGGACACCTCGCTGTCCAGCTTCGCGACCGCCTTCGTGGGGTTCGTGCGCCAGGCGATGGAGGAGGCGATGGAGCAGGGCGGATCCGGCCGGGCGCGGCGCTGA
PROTEIN sequence
Length: 307
MLTLRQIEVVRAVMLSGSIAGAARLLNVAQPGVSRTMKHIEATIGIRLFARRGGRHVPAVEARDVFEQLQAVNEKIENLNAAIRQLHAGADVELRIGSVPSIANVMVPRAIEKLRRRFPGLRVTIDVLKIEEAIDHLLLGRGEVVLMSQRYTNASIVFDDLARGRLVCIVAPTHPLAGMAVIAARDLAPYPLIGIDPRDPYGRIMTDLFERDGLAYTITIRARFGTTVCALVKQNLGVALIDAFTVADSPASDLVVIPLAEPTDFPTFVAHRADTSLSSFATAFVGFVRQAMEEAMEQGGSGRARR*