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berkeley_reactor_200306_biofilm_scaffold_7733_37

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(41312..42202)

Top 3 Functional Annotations

Value Algorithm Source
aroE1; shikimate dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 290.0
  • Bit_score: 376
  • Evalue 5.50e-102
Shikimate dehydrogenase AroE {ECO:0000313|EMBL:AFL50805.1}; EC=1.1.1.25 {ECO:0000313|EMBL:AFL50805.1};; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 290.0
  • Bit_score: 376
  • Evalue 2.70e-101
Shikimate dehydrogenase AroE n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X4J9_RHIFR similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 290.0
  • Bit_score: 376
  • Evalue 1.90e-101

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Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
GTGTCGGCAGAAGGGTCAACCGGAACCCCCGTTCGGGCAGCGCTGATCGGCGCCGGCATCCAGGCTTCGCTGACGCCGGCCCTGCACATGGCCGAGGGCTCGGCCAACGGCCTCGCCTATGACTATGAGCTGATCGACCTGGAGCGGCTGCATCTCGATGCCTCCGCGCTGCCGCAGATCCTCCAGGCGGCCGAGCGGCGCGGCCTCGTCGGCCTCAACGTCACCCATCCCTGCAAGCAGGCGGTCCTCGCCGAGCTCGATGCGCTCTCCGACGACGCCGCCGCGTTGCGCGCGGTCAACACCGTCGTGCTGCGCGGGGGCCGGCGCGTCGGCCACAACACCGACTGGTCGGGCTTTCGGGAGGGCTTCAGGCGAGCCCTGCCGGACGCCGACCTCCGCGCCGTCGTCCAGCTCGGGGCCGGGGGTGCCGGCGCCGCCGTCGCCCATGCCGCGCTCGTCATGGGGTCGGCGGCGCTCACCCTGTTCGACCGCGAGGCGGACCGGGCCGAGCGGCTGGCGGCCGACCTTGCCGGGCGCTTCCCCGACCGCCGCATCCGCGCCGGCGGGGACCTCGACGCGGTAATGGCGACGGCCACCGGCCTGATCCATGCGACGCCGACCGGCATGCGCGGCCATCCCGGCATGCCGCTGCCCGCGCACCTCCTCGACGGCCGGCCCTGGGTGGCGGAGATCGTCTACTTCCCGCTCGAGACCGAGCTCCTGCGCGCCGCCCGTGCCAGGGGCTGCCGCACCGTCGACGGCGGCGGCATGGCCGTGTTCCAGGCGGTCGGCGCCTTCCGCCTCTTCACCGGCCTGGAGCCCGATGCCGGCCGGATGCTGCGCCACTTCGAGAGCCTGGTGCGCGGCGAGCCCGCCGGCCGGAGCGGATGA
PROTEIN sequence
Length: 297
VSAEGSTGTPVRAALIGAGIQASLTPALHMAEGSANGLAYDYELIDLERLHLDASALPQILQAAERRGLVGLNVTHPCKQAVLAELDALSDDAAALRAVNTVVLRGGRRVGHNTDWSGFREGFRRALPDADLRAVVQLGAGGAGAAVAHAALVMGSAALTLFDREADRAERLAADLAGRFPDRRIRAGGDLDAVMATATGLIHATPTGMRGHPGMPLPAHLLDGRPWVAEIVYFPLETELLRAARARGCRTVDGGGMAVFQAVGAFRLFTGLEPDAGRMLRHFESLVRGEPAGRSG*