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berkeley_reactor_200306_biofilm_scaffold_7733_47

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(54405..54806)

Top 3 Functional Annotations

Value Algorithm Source
PTS system fructose subfamily IIA component n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ILR2_AZOC5 similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 133.0
  • Bit_score: 203
  • Evalue 1.00e-49
PTS system fructose subfamily transporter subunit IIA similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 133.0
  • Bit_score: 203
  • Evalue 2.80e-50
PTS system fructose subfamily IIA component {ECO:0000313|EMBL:BAF90066.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 133.0
  • Bit_score: 203
  • Evalue 1.40e-49

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Taxonomy

Azorhizobium caulinodans → Azorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
ATGATCGGCATCGTGCTCGTGACCCACGGTCGCCTCGCGACCGAATTCCGCGCCGCGCTCGAGCACGTCGTCGGCCCGCAGCAGCAGATCGAGGCCATCAATATCGGCCCGGAGGATGACGTCGAGCAGCGTCGGCGCGACATCATCCGCGCCGTCGGCGAGGTCGACAGCGGCCAGGGCGTCGTCCTGCTCACCGACATGTTCGGCGGCACGCCCTCCAACCTCGCCATCTCCGTGATGAGCGGCCCCTCGATCGAGGTGGTCGCCGGCGTCAACCTGCCCATGCTGGTGAAGCTCGCCAGGGTCCGCGGCGAGAAGTCGCTGGCGGACACGGTTGCCGTCGCGCAGGAGGCGGGCCGTAAATATATCAACATCGCCAGTCGCGTTTTGTCAGGTCAATGA
PROTEIN sequence
Length: 134
MIGIVLVTHGRLATEFRAALEHVVGPQQQIEAINIGPEDDVEQRRRDIIRAVGEVDSGQGVVLLTDMFGGTPSNLAISVMSGPSIEVVAGVNLPMLVKLARVRGEKSLADTVAVAQEAGRKYINIASRVLSGQ*