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berkeley_reactor_200306_biofilm_scaffold_7733_50

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(57269..57967)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QLT7_METTR similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 232.0
  • Bit_score: 411
  • Evalue 4.20e-112
two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 233.0
  • Bit_score: 407
  • Evalue 1.70e-111
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABJ04777.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 233.0
  • Bit_score: 407
  • Evalue 8.60e-111

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGCCGACCATCGCCCTCGTCGACGACGACCGCAACATCCTCACTTCCGTTTCGATCGCTCTCGAAGCGGAAGGCTACCGGATCCAGACCTACAATGACGGTGTCGCCGCCCTGGAAGGGCTGAAGACCAGCCCGCCGGACCTTGCCATCTTCGACATCAAGATGCCGCGCATGGACGGCATGGAGCTCCTGCGCCGTCTCCGGCAGAAGTCGGAGCTGCCCGTCATCTTCCTCACCTCCAAGGACGAGGAGATCGACGAGCTCTTCGGCCTGAAGATGGGCGCGGACGACTTCATCCGCAAACCCTTCTCCCAGCGCCTGCTGGTCGAGCGCGTCAAGGCGGTGCTGCGCCGGGCCCAGCCCAAGGACGCGGCCGCGGCCAAGGGCTCGGACGCCAAGATCCTCGACCGCGGCCTCTTGCGCATGGACCCGGAGCGCCACACCTGCACCTGGAAGGGCGAGCAGGTGGTGCTCACCGTCACCGAGTTCCTGATCCTGCACGCGCTGGCGCAGCGCCCGGGCGTGGTGAAGAGCCGCAACGCCCTGATGGATGCGGCCTATGACGACCAGGTCTATGTCGACGACCGCACCATCGACAGCCACATCAAGCGCCTGCGCAAGAAGTTCAAGCAGGCGGACGACGAATTCGAGATGATCGAAACGCTCTATGGCGTTGGATACCGTTTCAAGGAGGCATGA
PROTEIN sequence
Length: 233
MPTIALVDDDRNILTSVSIALEAEGYRIQTYNDGVAALEGLKTSPPDLAIFDIKMPRMDGMELLRRLRQKSELPVIFLTSKDEEIDELFGLKMGADDFIRKPFSQRLLVERVKAVLRRAQPKDAAAAKGSDAKILDRGLLRMDPERHTCTWKGEQVVLTVTEFLILHALAQRPGVVKSRNALMDAAYDDQVYVDDRTIDSHIKRLRKKFKQADDEFEMIETLYGVGYRFKEA*