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berkeley_reactor_200306_biofilm_scaffold_11784_6

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(3463..3975)

Top 3 Functional Annotations

Value Algorithm Source
HpcH/HpaI aldolase n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=A9W550_METEP similarity UNIREF
DB: UNIREF100
  • Identity: 41.1
  • Coverage: 163.0
  • Bit_score: 92
  • Evalue 4.20e-16
HpcH/HpaI aldolase similarity KEGG
DB: KEGG
  • Identity: 41.1
  • Coverage: 163.0
  • Bit_score: 92
  • Evalue 1.20e-16
HpcH/HpaI aldolase {ECO:0000313|EMBL:ABY30706.1}; TaxID=419610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain PA1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.1
  • Coverage: 163.0
  • Bit_score: 92
  • Evalue 5.90e-16

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Taxonomy

Methylobacterium extorquens → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGAAATCGCTGCTGATCGCGGCTGCCGATGCGCTGGCGGACGGGCCGGCGGCGGATTTGGTCGCCCTCGACCTCGCCGCCGGATCGGCCGGAGCCCTGCCGGCAGGCGCGGTCCATGTCGCCGTCGCGCCGGTCGAGGCGGCGGCGAGCGCCGCCGGGCTCGCCCGGGCCATGGCGCTGGCGCCGGCCGGCATCGTGCTGGAGGGCGCGCGGAGCGGCCGCGACGTGACGCTGCTCGATGCGCGCCTGGCGGTGTGCGAGGCCGAGCGCGGGCTGGCGCATGGCGGCACGTCCATCATCGCCGTGGCGAGCGCCGAGGCGCTGATCGAGATCGGCAGCTTCCGCGGCGCCTCGGCCCGGCTCGCCGGCCTCGCCTTCGATCCCGAGGCGCTGGAACGGGAGCTCGGCGCCCCGGATGCGGCCGTGAGCGAGCTCGCGCGCGGCATGGTCGTGCTCGCGGCGCGGGCGGCCGGCGTGCCGGCCTTCCGGGTGATCCGGCGCCCGCCCGCCTGA
PROTEIN sequence
Length: 171
MKSLLIAAADALADGPAADLVALDLAAGSAGALPAGAVHVAVAPVEAAASAAGLARAMALAPAGIVLEGARSGRDVTLLDARLAVCEAERGLAHGGTSIIAVASAEALIEIGSFRGASARLAGLAFDPEALERELGAPDAAVSELARGMVVLAARAAGVPAFRVIRRPPA*