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berkeley_reactor_200306_biofilm_scaffold_11784_7

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 4064..5104

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000372B910 similarity UNIREF
DB: UNIREF100
  • Identity: 48.9
  • Coverage: 325.0
  • Bit_score: 265
  • Evalue 7.30e-68
lytic transglycosylase similarity KEGG
DB: KEGG
  • Identity: 46.1
  • Coverage: 343.0
  • Bit_score: 245
  • Evalue 2.20e-62
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ADU43603.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.1
  • Coverage: 343.0
  • Bit_score: 245
  • Evalue 1.10e-61

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1041
ATGGTCCTTTTCAGCTCCTCGGCGGCCCCGTCCGCGGATCGCGTCCAGAACGCGCTCCGCAGCGCGAGCGCGGCCACGGGCACCGGCTTCGACTATCTCATGACCACGGCGGGGCGTGAATCCGCCTTCGATCCCACCGCCAAGGCCGCGACCTCCTCCGCCGCCGGCCTGTTCCAGTTCCTCGATTCCACCTGGATGCAGACGGTGAAGGAGGACGGCCCCGCCTTCGGCCTGCAGGCCTATGCCGACGCCATCCAGCGCACCACCGGCGGGCGCTACGTCGCCGCCGATCCGGCGGCGCGCCAGGCGGTCCTGGCCCTGCGCGAGGACCCGGAGGTCAGCGCCCTGATGGCCGGTGCCTTCACCCGCCGCAACCGCGACCAGCTCACCGCGGCCCTGGGGCGGGCGCCGAGCGACGGCGAGCTCTACATCGCCCATTTCATGGGCGCGAGCGGCGGCGCCGGCCTGATCCGCCTGGCCGCCAGCGACGGCGCGGCGAATGCGGCCGGCGCCTTCCCGGTGCAGGCGGCCGCCAATCCGTCGATCTTCTACGACAAGGCCGGCCGGGCGCGCTCGGCCGCCGAGGTCTACGGCGGGCTGGTCAAGCCTTTCGAGGCCGGAGCGTCCGGCCCGGCCGCGATCGCCTCTGCCGGCGCGGATCAGGGGGCGGCGGCGGTCGGGCCGGCCGTCTGGCTCGCCATTCCCGCCCGCAACGCCTATGCCGCGGAGAGCCGGACCGCCGCCGCGGCCGCCGGCCCGTTCCAGAGCCTGTTCCGGACCGACGGCGCCGCGCCGATCTCCAATGCCGTCGCCGCCACCTGGTCCGGCCTCGGCCCGGCCCTGGCGACGACGGCTCCCGCGGCGACCTCCGCGCCGGTCGAGCTCCGGTCCGTCCCGACCGCGGCGCCGGTGCATGCGCCGCAGCCGCAGGCCGAGGCGCCCGCCACGGACCTGTTCTCGGCCATCGGCGCCTTCTTCTCCGGCATTTTCTCTCCATCCGATGCCGCACCGGTGGCGCTCGGCAAGCGCGGGAGTTCGTAA
PROTEIN sequence
Length: 347
MVLFSSSAAPSADRVQNALRSASAATGTGFDYLMTTAGRESAFDPTAKAATSSAAGLFQFLDSTWMQTVKEDGPAFGLQAYADAIQRTTGGRYVAADPAARQAVLALREDPEVSALMAGAFTRRNRDQLTAALGRAPSDGELYIAHFMGASGGAGLIRLAASDGAANAAGAFPVQAAANPSIFYDKAGRARSAAEVYGGLVKPFEAGASGPAAIASAGADQGAAAVGPAVWLAIPARNAYAAESRTAAAAAGPFQSLFRTDGAAPISNAVAATWSGLGPALATTAPAATSAPVELRSVPTAAPVHAPQPQAEAPATDLFSAIGAFFSGIFSPSDAAPVALGKRGSS*