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berkeley_reactor_200306_biofilm_scaffold_5879_14

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 15585..16433

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00036AEF64 similarity UNIREF
DB: UNIREF100
  • Identity: 77.9
  • Coverage: 280.0
  • Bit_score: 442
  • Evalue 2.10e-121
Glycine betaine ABC transporter permease protein {ECO:0000313|EMBL:GAJ93619.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 282.0
  • Bit_score: 436
  • Evalue 1.60e-119
glycine betaine/L-proline ABC transporter similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 282.0
  • Bit_score: 434
  • Evalue 1.60e-119

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 849
ATGGACATCTCAGGCTTTGCAGACGGCTTCGACAGCGTGACGGACGCGGCCCTGGAATGGCTGGGGGATCACGGCGAGGTCGTCTTCGACCTTGCCCGCAAGGTGCTGGAGGGCCTCTACGACGGCATCCTGTGGGCGATTTCGCTCCCACCCTTCTACGTGGTCGCGATCATTGTCGCCGTCGCCGGGGCGCGGCTCGTCAATATCTGGTTCGGGGCCCTGGCTGGGCTCGCACTCGCCTTCTGCGCGATCATGGGATTGTGGCCGCAGACCGTCGGCACCCTGTCGCTGGTCGTGACCGCGACGGTGCTCGCCCTTGCCGTCGGCATACCGGGCGGCGTGGTCGCCGGCTTTGTCCCGGCCATCGACCGGCTTCTCGAGCCGATTCTCGATCTGGTCCAGACCCTGCCGCCCTACATCTATCTGCTCCCGGCCATCGGCCTGCTCGGATATGGGCCGGCGACGGCGCTGGTCGCGACCATCATCGTTGCCCTGCCGCCGGCCCTGCGCCTCACGTCTCTCGGCATTCGCATGACGCCGCTGGAGTTCATCGAGCTCGGCAAGGCGACCGGCATGACGACGTGGCAGATGTTCTGGAAGATCCGTCTGCCCTTTGCCATGCCGAGCATCATGGCCGGCATCAACCAGAGCCTGATGATGGCCTTCGGCATGGTGGTCATCGCCGGCATCGTCGGCTCGGGCGGCCTCGGCGAGACCATCTACGGCGCGATCCGCACGCTCGACATCGCCAAGTCGATCGATGCGGCCATCGCCATCGTCATCCTCACCATGGTGCTCGACCGCCTGACGCAAAGCGCCGTCCGCCTGAACGCCGGAGGCAGGACATGA
PROTEIN sequence
Length: 283
MDISGFADGFDSVTDAALEWLGDHGEVVFDLARKVLEGLYDGILWAISLPPFYVVAIIVAVAGARLVNIWFGALAGLALAFCAIMGLWPQTVGTLSLVVTATVLALAVGIPGGVVAGFVPAIDRLLEPILDLVQTLPPYIYLLPAIGLLGYGPATALVATIIVALPPALRLTSLGIRMTPLEFIELGKATGMTTWQMFWKIRLPFAMPSIMAGINQSLMMAFGMVVIAGIVGSGGLGETIYGAIRTLDIAKSIDAAIAIVILTMVLDRLTQSAVRLNAGGRT*