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berkeley_reactor_200306_biofilm_scaffold_5879_15

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 16430..17275

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00035C6179 similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 277.0
  • Bit_score: 425
  • Evalue 3.40e-116
Glycine betaine/L-proline transport system permease protein proW {ECO:0000313|EMBL:KEC77232.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 279.0
  • Bit_score: 428
  • Evalue 5.70e-117
glycine betaine/L-proline ABC transporter permease protein similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 278.0
  • Bit_score: 419
  • Evalue 7.00e-115

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Taxonomy

Sinorhizobium americanum → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 846
ATGAACCCCGTCCAGTTCTCGCCGGGCACCTACCTGGCGCCGGTGGTCGACTGGCTCAACGCCAGCCTGCACCCGCTGTTCATGGCCATCAGCGCCCTGATCGAAGCCGTTCTGGGCGGCATCGAAACGGCGCTGCTCTTCCCACCGCCCCTCGTGCTGATCGCCGTCGTGGTGGCGCTGGCCTTCGTTCTGGCGAATGTCGGGGTGGCGATCCTCGCGGCCCTTGCCTTGGGGTTCTGCCTCGTCGCCAACCTCTGGACGGCCTCGATGCAGACGATCGCGCTGGTCTCGGTCTCGGTCGCCATCTCGGTGCTGATCGCATTTCCGCTCGGCATCCTGGCGTCGCGCTTCAAGGGCGTCGAAGCGGCCGTGCGGCCATTTCTGGACATGATGCAGACCGTGCCGCCCTGGGTCTACCTGATCCCGGCTGTGATCTTCTTCAGCCTCGGCAGGGTGCCGGCGGTGATCGCGACCATCGTCTATGGCGTTCCGCCGATGCTGCGCCTGACGACCCTCGCCTTGAGCCAGGTCCCGAAGGAGTTCCTGGAGCTCGGCCAGGCGATCGGCGCGCCGCCGCGCTCCATCCTGGTCAAGATCGAGCTCCCCTTGGCCAAGCCGACGCTGCTCGTCGGCCTCAACCAGTGCATCCTGCTGTCGCTCGCCATGGTCGTGCTGGCCGGCATGGTCGGGGCGGGCGGCCTCGGCGCCGAGGTCACGAGAGGCCTGACGCGCATGGAGATGGGGCTCGGCCTTCGCGCCGGCCTCGCCATCGTCGCCGTGGCCTTGCTGTTCGACCGCCTGACCCGCGGGGCGCTGCAGCGCGGCCAGACGGCGCCCCGGACCTGA
PROTEIN sequence
Length: 282
MNPVQFSPGTYLAPVVDWLNASLHPLFMAISALIEAVLGGIETALLFPPPLVLIAVVVALAFVLANVGVAILAALALGFCLVANLWTASMQTIALVSVSVAISVLIAFPLGILASRFKGVEAAVRPFLDMMQTVPPWVYLIPAVIFFSLGRVPAVIATIVYGVPPMLRLTTLALSQVPKEFLELGQAIGAPPRSILVKIELPLAKPTLLVGLNQCILLSLAMVVLAGMVGAGGLGAEVTRGLTRMEMGLGLRAGLAIVAVALLFDRLTRGALQRGQTAPRT*