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berkeley_reactor_200306_biofilm_scaffold_5879_20

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(22079..23521)

Top 3 Functional Annotations

Value Algorithm Source
Type III restriction protein res subunit n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRR2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 463.0
  • Bit_score: 763
  • Evalue 1.20e-217
Type III restriction protein res subunit {ECO:0000313|EMBL:EHK56575.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 463.0
  • Bit_score: 763
  • Evalue 1.70e-217
helicase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 476.0
  • Bit_score: 701
  • Evalue 1.20e-199

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Taxonomy

Mesorhizobium alhagi → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1443
ATGCCCCGCTCCGCTCCTGTCGATGCTCCCGTCTTCGTCCCGCGCCCGCACCAGGCGGCGGCGCGCGACGCCATGCTGCGCGCCCGGGCCGAGGGCCGCCCCGGCTTCCTGCTCGGCGACCTCACCGGCCTCGGCAAGACCCTGTCGGCCTGGCTGGCGGTCGCCGCCATGCCCGAGACCGAGGTCCTGGTCATCTGCCCCAAGGGCGCCATCCCGCAATGGCGGCGGACGATCGCCGGCTCGCCGCGCACCGGCAAGGCGGTGACGATCCTCAACTATGAACGGACCAAGTCCCTGCTGGCCCCGCCGGCCGTCAGCACGAGGCGCTCGGTGCGGGCCAAGAACAACGAGCTGGCCCGCCACGGCCGGCCGAAGCGGACCTGGCCGATCGTGGTGATCGACGAGAGCCACCGCATCCGCAACCCGGCCTCCCAGCAGGGCCTGGTCTGCCGGCAGATGGCCGCGGCGGCGGGTTTCACCATCTATATGAGCGCGACCGCCGGCCAGTCGCCGCACGAATTGTCCTATCTCGGCAGGCTCCTGGCCTTCGCCACCGGCGGCGAGGGCGGCGACCTCGACGAGTTCCGCGTGCTGATGAAGCGCCTCAGGATCGGACGGGCCAAGGGGCGCTGGAAGAACTGGGGCTGGGAGCCGAACGAGCGCGACCGCACGGTCATGTCGGACCTGCTCTACAAGGGCGCCCGCGCCATCGGCCTGCGCCGCCGGCCGGAGGAGATCGCCGGCTGGCCCGAGGTGCAGCGCGAGCTGGCGCCGACCGCGCTCGATGCCGCCAGCCGCCGCCTCTACGAAGCGACCTGGCGCGAGTTCCGGCGCGAGCTGGGCCTCGCCGGCGGCAGCACCCGCCGCCCCACCGGCTGGGCCGCGGACCTGCGCTTCCGGCAGAAGGCCAGCCTGATCCGCATCGCCGGCACGGCCGACTTCGCCGACGACCTGCTGGCCAACGGCCAGCAGGTCGCCCTCTCCGTCGCCTTCCTGGAGACCAGCGCCATGCTGGCGGAGGCGCTGCGGGGCAAGGGCTGGACCGTCGGCGAGATCAACGGCGAGCGGACGGGCGAGGCCAACGAGGAGACCCGCATCGCCTTCCAGACCGGACGGCTCGACGCCGTGGTCTTCACCGTGACGGAATCGATCTCGCTGCACCGGGGCGAGCTGCCCGGCGGGGACCGGGAGCGCTCGCTGGTGGTGCACGACATGCGCCACAGCGCCATCCAGCTGGCGCAGATCGAAGGCCGCTGCCATCGCGACGGCCAGCGGGCGGTGATCTACTACACCTATGCCGAGGCCACGGTGGAGGAGACCATCGCCGCCACCGTCATCGCCCGCATGGCCTCGATGGACGCCATGGCCGGCGACGACACGGCCATGCTCGACGCCATCGCCGGCATCATCGAAGCCTCGAGCGGGCAGGCCGACGCGGCCTGA
PROTEIN sequence
Length: 481
MPRSAPVDAPVFVPRPHQAAARDAMLRARAEGRPGFLLGDLTGLGKTLSAWLAVAAMPETEVLVICPKGAIPQWRRTIAGSPRTGKAVTILNYERTKSLLAPPAVSTRRSVRAKNNELARHGRPKRTWPIVVIDESHRIRNPASQQGLVCRQMAAAAGFTIYMSATAGQSPHELSYLGRLLAFATGGEGGDLDEFRVLMKRLRIGRAKGRWKNWGWEPNERDRTVMSDLLYKGARAIGLRRRPEEIAGWPEVQRELAPTALDAASRRLYEATWREFRRELGLAGGSTRRPTGWAADLRFRQKASLIRIAGTADFADDLLANGQQVALSVAFLETSAMLAEALRGKGWTVGEINGERTGEANEETRIAFQTGRLDAVVFTVTESISLHRGELPGGDRERSLVVHDMRHSAIQLAQIEGRCHRDGQRAVIYYTYAEATVEETIAATVIARMASMDAMAGDDTAMLDAIAGIIEASSGQADAA*