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berkeley_reactor_200306_biofilm_scaffold_5879_21

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(23570..24202)

Top 3 Functional Annotations

Value Algorithm Source
alkylated DNA repair protein n=1 Tax=Rhizobium loti RepID=UPI00036DAA0C similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 203.0
  • Bit_score: 283
  • Evalue 9.20e-74
Alkylated DNA repair protein {ECO:0000313|EMBL:ESX75820.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 198.0
  • Bit_score: 283
  • Evalue 2.20e-73
2OG-Fe(II) oxygenase similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 189.0
  • Bit_score: 280
  • Evalue 2.20e-73

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Taxonomy

Mesorhizobium sp. LSHC414A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGTCCCGTTCCCGACCGCAGGCGACGCAGCCCGAATCCCAGGCCGATCTCTTCGGCGCCGCGCCCGCGCTGCCGCAGGGATTCCTCTACCGGCCCGCCTTCATCGGCGCGGACGAGGAGGCCGAGCTGGTCGGCCGGCTGCAATCCCTGCCCTTCGCGCCGTTCGACTTTCAGGGCCACCTCGCCAATCGCCGCGTCGTCGGCTTCGGCTACCGCTACGACTATGAGCGCCGCCGGCTGGTCGAGGCCGCCGGAATCCCGCCGTTCCTGCATGGGCTGCGGGACAGGGCGGCCGCGGTCGCCGGCCTGCCGGCGACGGATTTCGTCCAGGTGCTGATCAACGAGTACCGGCCCGGCGCCGGCATCGGCTGGCATCGCGACAAGCCGCATTTCGAGGCGGTCGCCGGCGTCTCGCTGTGCGCGCCCTGCAGCTTCCGCCTGCGCCGGCAGGAGGGCGATACGTGGCAGCGCCGGACCATCGTCGCCGAGCCCCGATCGCTCTACGTCATGACGGGCCCGGCCCGGAACGAATGGGAGCACAGCATCCCGCCCGTCGACGCGCACCGCTATTCCATCACCCTGCGCACGCTCCGTCCCGGGATCGCCGGCGGGATTCCGACCGAGCCGGATTGA
PROTEIN sequence
Length: 211
MSRSRPQATQPESQADLFGAAPALPQGFLYRPAFIGADEEAELVGRLQSLPFAPFDFQGHLANRRVVGFGYRYDYERRRLVEAAGIPPFLHGLRDRAAAVAGLPATDFVQVLINEYRPGAGIGWHRDKPHFEAVAGVSLCAPCSFRLRRQEGDTWQRRTIVAEPRSLYVMTGPARNEWEHSIPPVDAHRYSITLRTLRPGIAGGIPTEPD*