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berkeley_reactor_200306_biofilm_scaffold_5879_27

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 29954..31558

Top 3 Functional Annotations

Value Algorithm Source
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 524.0
  • Bit_score: 737
  • Evalue 8.30e-210
phosphoenolpyruvate carboxykinase n=1 Tax=Kaistia granuli RepID=UPI00035D2B5B similarity UNIREF
DB: UNIREF100
  • Identity: 73.1
  • Coverage: 513.0
  • Bit_score: 759
  • Evalue 1.90e-216
phosphoenolpyruvate carboxykinase similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 524.0
  • Bit_score: 737
  • Evalue 1.70e-210

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Taxonomy

Polymorphum gilvum → Polymorphum → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1605
TTGACTCTTCGGATCATCGGCGGCGGGCAGGACGAGCGGGACGACCCGATTCACTTCAACAACCTGGCCGCGCTGCATGCGAACCTGGACGAGCCGAGCCTCTACGAGGAGGCGATCCGGCGGCGGGAAGGGCGCATCAGCGAAGGCGGCGCCCTCGTGGTCGAGACCGGCTCCCATACCGGCCGCTCGCCCAAGGACAAGTTCGTGGTGCGCGAGGCCGCGACCGAGAGCACGGTGTGGTGGGACAACAACAACGCCGTGAGCCGCGAGGCGTTCGACCGCCTGCTGGCCGACATGCTTTGGCACGCCACCGGCAAGGAACTGTTCATGCAGGACCTGCGCGGCGGCGCCGATCCGGCCTATGGCATCAATGTCCGCGTCTATACCGAGCTCGCCTGGCACAGCCTGTTCATCCGCAACCTCCTGATCCGGCCCGAGGCGGCCGAGCTGGCCGGCTTCTGGCCGGACCTGACCATCATCGACCTGCCGAGCTTCAAGGCCGACCCGGAGCGGCACGGCTGCCGCTCGGAGACGGTGGTCGCCTGCGACCTCGCCAACGGCATCGTGCTGATCGGCGGCACCGCCTATGCCGGCGAGATGAAGAAGTCGGTGTTCACCATGCTGAACTACCGGCTGCCTGGCCTCGGGGTGATGCCGATGCACTGCTCGGCCAATGCCGGGGCGGAGGGCGGCTCGGCCGTGTTCTTCGGCCTGTCCGGCACGGGCAAGACCACGCTGTCGGCCTCGCCCGACCGCACGCTGATCGGCGACGACGAGCATGGCTGGAGCGGCAACGGCATCTTCAACTTCGAGGGCGGCTGCTACGCCAAGACCATCAGGCTCAAGGCCGAGGAGGAGCCGCTGATCCACGCGGCGACGCAGCGCTTCGGCACGGTGCTGGAGAACGTCGCCATGGGGCGGTCCGGGCGGCACATCGACTTCGACGACGACCGCAAGACCGAGAACACCCGGGCGGCCTATCCCCTGCACTTCATCGCCAACGCCTCGGCCACGGGCCAGGCAGGTCATCCCAAGAACGTGGTGATGCTGACCGCGGATGCCTTCGGCGTGATGCCGCCGATCGCCAGGCTGACGGCGGACCAGGCGATCTACCACTTCCTCTCCGGCTTCACCGCCAAGGTCGCCGGCACCGAGCGCGGCGTCACCGAGCCGCAGCCGACCTTCTCGGCCTGCTTCGGCGCGCCGTTCCTGCCGCGCCATCCCGCGGTCTACGCCACGCTGCTGCGCGACCTGATCCGCCGGCACGAGGTCGACTGCTGGCTGGTCAACACCGGCTGGACCGGCGGGGCCTACGGCGTCGGCCGGCGCATGCCGATCGTCTGGACGCGCACCCTGCTCAACGCCGCCCTCGACGGCTCGCTGGCCCGGGGCGCCTTCCGCACCGACCGCTATTTCGGCTTCAAGGTGCCGACCGATGTTCCCGGCGTGCCCAAGCACGTGCTCGACCCCTTCAAGACGTGGTCGGACAAGGCGGGCTACGACGCCCAGGCCAGGAAGCTGGTCGGCATGTTCGTGCAGAACTTCGCCCGCTTCGAGGGGGCGGTGACGTTCGACGCCGCGGATGCGGTGCTGACGGCGGGGTAG
PROTEIN sequence
Length: 535
LTLRIIGGGQDERDDPIHFNNLAALHANLDEPSLYEEAIRRREGRISEGGALVVETGSHTGRSPKDKFVVREAATESTVWWDNNNAVSREAFDRLLADMLWHATGKELFMQDLRGGADPAYGINVRVYTELAWHSLFIRNLLIRPEAAELAGFWPDLTIIDLPSFKADPERHGCRSETVVACDLANGIVLIGGTAYAGEMKKSVFTMLNYRLPGLGVMPMHCSANAGAEGGSAVFFGLSGTGKTTLSASPDRTLIGDDEHGWSGNGIFNFEGGCYAKTIRLKAEEEPLIHAATQRFGTVLENVAMGRSGRHIDFDDDRKTENTRAAYPLHFIANASATGQAGHPKNVVMLTADAFGVMPPIARLTADQAIYHFLSGFTAKVAGTERGVTEPQPTFSACFGAPFLPRHPAVYATLLRDLIRRHEVDCWLVNTGWTGGAYGVGRRMPIVWTRTLLNAALDGSLARGAFRTDRYFGFKVPTDVPGVPKHVLDPFKTWSDKAGYDAQARKLVGMFVQNFARFEGAVTFDAADAVLTAG*